1. Intensive Care Medicine Department, Centro Hospitalar Universitário Lisboa Central, 1150-199 Lisbon, Portugal
2. Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Av. Padre Cruz, 1649-016 Lisbon, Portugal
3. Infection Prevention and Control and Antimicrobial Stewardship, Centro Hospitalar Universitário Lisboa Central, 1150-199 Lisbon, Portugal
4. Innovation and Technology Unit, Department of Human Genetics, National Institute of Health Doutor Ricardo Jorge (INSA), Av. Padre Cruz, 1649-016 Lisbon, Portugal
5. Reference Unit for Parasitic and Fungal Infections, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Av. Padre Cruz, 1649-016 Lisbon, Portugal
6. Faculty of Veterinary Medicine, University of Lisbon, Av. Universidade Técnica, 1300-477 Lisbon, Portugal
7. Instituto de Saúde Ambiental, Faculdade de Medicina, Universidade de Lisboa, 1649-028 Lisbon, Portugal
8. Laboratório Associado TERRA–Laboratório para o Uso Sustentável da Terra e dos Serviços dos Ecossistemas, Instituto Superior de Agronomia, Tapada da Ajuda, 1349-017 Lisbon, Portugal