Associations between the Gut Microbiota, Race, and Ethnicity of Patients with Colorectal Cancer: A Pilot and Feasibility Study

Author:

Piawah Sorbarikor123,Kyaw Than S.45,Trepka Kai4ORCID,Stewart Anita L.367,Mora Rosa V.5,Stanfield Dalila2,Levine Kendall18,Van Blarigan Erin L.910ORCID,Venook Alan12,Turnbaugh Peter J.411ORCID,Nguyen Tung123,Atreya Chloe E.1212

Affiliation:

1. Department of Medicine, University of California, San Francisco, CA 94143, USA

2. Helen Diller Family Comprehensive Cancer Center, San Francisco, CA 94143, USA

3. UCSF Center for Aging in Diverse Communities, San Francisco, CA 94143, USA

4. Department of Microbiology and Immunology, University of California, San Francisco, CA 92521, USA

5. School of Medicine, University of California, San Francisco, CA 92521, USA

6. Institute for Health & Aging, University of California, San Francisco, CA 92521, USA

7. School of Nursing, University of California, San Francisco, CA 92521, USA

8. Zuckerberg San Francisco General Hospital, San Francisco, CA 94110, USA

9. Department of Urology, University of California, San Francisco, CA 92521, USA

10. Department of Epidemiology and Biostatistics, University of California, San Francisco, CA 92521, USA

11. Chan Zuckerberg Biohub-San Francisco, San Francisco, CA 40385, USA

12. Osher Center for Integrative Medicine, San Francisco, CA 94115, USA

Abstract

Background: Colorectal cancer (CRC) is more prevalent among some racial and ethnic minority and low socioeconomic status populations. Although the gut microbiota is a risk factor for CRC and varies with race and ethnicity, its role in CRC disparities remains poorly understood. Methods: We examined the feasibility of recruiting sociodemographically diverse CRC patients for a microbiome study involving a home stool collection. We also explored whether race and ethnicity were associated with gut microbiome composition. We recruited Black/African American, Hispanic/Latino, and non-Hispanic White patients who were receiving care for active CRC to complete a comprehensive dietary and lifestyle survey, self-collect a stool sample, and complete an exit interview. Gut microbial diversity and composition were analyzed using 16S rRNA gene sequencing. Results: 30 individuals consented (of 35 who were eligible and contacted) with 5 (17%) Black/African American, 11 (37%) Hispanic/Latino, and 14 (46%) non-Hispanic White. A total of 22 (73%) completed the dietary and lifestyle survey; 18 (63%) returned a stool sample. Even after controlling for socioeconomic, dietary, or treatment-related covariates, microbiome composition was associated with race and ethnicity. Fusobacteriota (a phylum associated with the development and progression of CRC) was significantly higher in the Black/African American group compared to others, and microbial diversity was higher in samples from non-Hispanic White individuals compared to Hispanic/Latino individuals. Conclusion: Our study shows that it is feasible to recruit and collect stool samples from diverse individuals with CRC and found significant associations in gut microbial structure with race and ethnicity.

Funder

National Institutes of Health

Damon Runyon Cancer Research Foundation

Publisher

MDPI AG

Subject

Cancer Research,Oncology

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