Minimal Conditions for Protocell Stationary Growth

Author:

Bigan Erwan1,Steyaert Jean-Marc2,Douady Stéphane3

Affiliation:

1. École PolytechniqueUniversité Paris Diderot

2. École Polytechnique

3. Université Paris Diderot

Abstract

We show that self-replication of a chemical system encapsulated within a membrane growing from within is possible without any explicit feature such as autocatalysis or metabolic closure, and without the need for their emergence through complexity. We use a protocell model relying upon random conservative chemical reaction networks with arbitrary stoichiometry, and we investigate the protocell's capability for self-replication, for various numbers of reactions in the network. We elucidate the underlying mechanisms in terms of simple minimal conditions pertaining only to the topology of the embedded chemical reaction network. A necessary condition is that each moiety must be fed, and a sufficient condition is that each siphon is fed. Although these minimal conditions are purely topological, by further endowing conservative chemical reaction networks with thermodynamically consistent kinetics, we show that the growth rate tends to increase on increasing the Gibbs energy per unit molecular weight of the nutrient and on decreasing that of the membrane precursor.

Publisher

MIT Press - Journals

Subject

Artificial Intelligence,General Biochemistry, Genetics and Molecular Biology

Reference18 articles.

1. A Petri net approach to the study of persistence in chemical reaction networks

2. Bigan, E., Steyaert, J.M. & Douady, S. (2013). Properties of random complex chemical reaction networks and their relevance to biological toy models. In Proceedings of Journées Ouvertes Biologie Informatique Mathématiques (JOBIM 2013). Available at http://arxiv.org/abs/1303.7439.

3. Bigan, E., Steyaert, J.M. & Douady, S. (2014). On necessary and sufficient conditions for proto-cell stationary growth. In Proceedings of the Fifth International Workshop on Static Analysis and Systems Biology (SASB 2014). Electronic Notes in Theoretical Computer Science (in press). Available at http://arxiv.org/abs/1411.6772.

4. Bigan, E., Steyaert, J.M. & Douady, S. (2015). Necessary and sufficient conditions for protocell growth. Journal of Mathematical Biology (submitted).

5. A relationship between membrane properties forms the basis of a selectivity mechanism for vesicle self-reproduction

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