Identification of circRNAs linked to Alzheimer's disease and related dementias

Author:

Puri Sambhavi12,Hu Junming3,Sun Zhuorui3,Lin Mintao3,Stein Thor D.4567,Farrer Lindsay A.238910,Wolozin Benjamin12,Zhang Xiaoling396

Affiliation:

1. Departments of Pharmacology & Experimental Therapeutics Boston University School of Medicine Boston Massachusetts USA

2. Departments of Neurology Boston University School of Medicine Boston Massachusetts USA

3. Departments of Medicine (Biomedical Genetics) Boston University School of Medicine Boston Massachusetts USA

4. Departments of Pathology and Laboratory Medicine Boston University School of Medicine Boston Massachusetts USA

5. Alzheimer's Disease Research Center Boston University School of Medicine Boston Massachusetts USA

6. Framingham Heart Study Boston University School of Medicine Framingham Massachusetts USA

7. Department of Veterans Affairs Medical Center VA Boston Healthcare System Boston Massachusetts USA

8. Departments of Ophthalmology Boston University School of Medicine Boston Massachusetts USA

9. Departments of Biostatistics Boston University School of Public Health Boston Massachusetts USA

10. Departments of Epidemiology Boston University School of Public Health Boston Massachusetts USA

Abstract

AbstractIntroductionCircular RNAs (circRNAs) exhibit selective expression in the brain and differential regulation in Alzheimer's disease (AD). To explore the role of circRNAs in AD, we investigated how circRNA expression varies between brain regions and with AD‐related stress in human neuronal precursor cells (NPCs).MethodsRibosomal RNA–depleted hippocampus RNA‐sequencing data were generated. Differentially regulated circRNAs in AD and related dementias were detected using CIRCexplorer3 and limma. circRNA results were validated using quantitative real‐time PCR of cDNA from the brain and NPCs.ResultsWe identified 48 circRNAs that were significantly associated with AD. We observed that circRNA expression differed by dementia subtype. Using NPCs, we demonstrated that exposure to oligomeric tau elicits downregulation of circRNA similar to that observed in the AD brain.DiscussionOur study shows that differential expression of circRNA can vary by dementia subtype and brain region. We also demonstrated that circRNAs can be regulated by AD‐linked neuronal stress independently from their cognate linear messenger RNAs (mRNAs).

Publisher

Wiley

Subject

Psychiatry and Mental health,Cellular and Molecular Neuroscience,Geriatrics and Gerontology,Neurology (clinical),Developmental Neuroscience,Health Policy,Epidemiology

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