Comparison of monovalent and divalent ion distributions around a DNA duplex with molecular dynamics simulation and a Poisson‐Boltzmann approach-Reference-Cited by-同舟云学术

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Comparison of monovalent and divalent ion distributions around a DNA duplex with molecular dynamics simulation and a Poisson‐Boltzmann approach

Published:2014-05-27 Issue:8 Volume:101 Page:834-848
ISSN:0006-3525
Container-title:Biopolymers
language:en
Short-container-title:Biopolymers

Author:

Robbins Timothy J.¹,Ziebarth Jesse D.¹,Wang Yongmei¹

Affiliation:

1. Department of ChemistryUniversity of MemphisMemphis TN38152

Funder

National Institute of General Medical Sciences

National Science Foundation

Oak Ridge Associated University /Oak Ridge National Lab

Publisher

Wiley

Subject

Organic Chemistry,Biomaterials,Biochemistry,General Medicine,Biophysics

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/bip.22461

Reference70 articles.

1. Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices.

2. Physical Chemistry of DNA Viruses

3. Abasic Site-Containing DNAzyme and Aptamer for Label-Free Fluorescent Detection of Pb2+ and Adenosine with High Sensitivity, Selectivity, and Tunable Dynamic Range

4. Identification of catalytic metal ion ligands in ribozymes

5. The hammerhead, hairpin and VS ribozymes are catalytically proficient in monovalent cations alone

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1. Spiers Memorial Lecture: Towards understanding of iontronic systems: electroosmotic flow of monovalent and divalent electrolyte through charged cylindrical nanopores;Faraday Discussions;2023

2. RNA Captures More Cations than DNA: Insights from Molecular Dynamics Simulations;The Journal of Physical Chemistry B;2022-10-19

3. Interaction between two polyelectrolytes in monovalent aqueous salt solutions;Physical Chemistry Chemical Physics;2022

4. Hydration and Charge-Transfer Effects of Alkaline Earth Metal Ions Binding to a Carboxylate Anion, Phosphate Anion, and Guanine Nucleobase;The Journal of Physical Chemistry B;2021-10-27

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