An Illumina metabarcoding pipeline for fungi-Reference-Cited by-同舟云学术

An Illumina metabarcoding pipeline for fungi

Published:2014-06-02 Issue:13 Volume:4 Page:2642-2653
ISSN:2045-7758
Container-title:Ecology and Evolution
language:en
Short-container-title:Ecol Evol

Author:

Bálint Miklós¹,Schmidt Philipp‐André¹²,Sharma Rahul²,Thines Marco¹²,Schmitt Imke¹²

Affiliation:

1. Biodiversity and Climate Research Centre Senckenberg Gesellschaft für Naturforschung Senckenberganlage 25 60325 Frankfurt/Main Germany

2. Institut für Ökologie, Evolution und Diversität Goethe Universität Frankfurt Max‐von‐Laue‐Str. 13 60438 Frankfurt/Main Germany

Funder

LOEWE Landes-Offensive zur Entwicklung Wissenschaftlich-ökonomischer Exzellenz of Hesses Ministry of Higher Education, Research, and the Arts, Germany

Publisher

Wiley

Subject

Nature and Landscape Conservation,Ecology,Ecology, Evolution, Behavior and Systematics

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/ece3.1107

Reference37 articles.

1. The UNITE database for molecular identification of fungi – recent updates and future perspectives

2. PlutoF—a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences

3. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

4. Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data

5. Sequencing our way towards understanding global eukaryotic biodiversity

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