The determinants of bond angle variability in protein/peptide backbones: A comprehensive statistical/quantum mechanics analysis-Reference-Cited by-同舟云学术

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The determinants of bond angle variability in protein/peptide backbones: A comprehensive statistical/quantum mechanics analysis

Published:2015-09-22 Issue:11 Volume:83 Page:1973-1986
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Improta Roberto¹,Vitagliano Luigi¹,Esposito Luciana¹

Affiliation:

1. Istituto di Biostrutture e Bioimmagini; Consiglio Nazionale delle Ricerche (CNR); Napoli I-80134 Italy

Funder

MIUR

Regione Campania

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Reference41 articles.

1. A fresh look at the Ramachandran plot and the occurrence of standard structures in proteins;Hollingsworth;Biomol Concepts,2010

2. Half a century of Ramachandran plots;Carugo;Acta Crystallogr D Biol Crystallogr,2013

3. Sparsely populated residue conformations in protein structures: revisiting “experimental” Ramachandran maps;Kalmankar;Proteins,2014

4. Experimentally observed conformation-dependent geometry and hidden strain in proteins;Karplus;Protein Sci,1996

5. Conformation dependence of backbone geometry in proteins;Berkholz;Structure,2009

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2. Learning Correlations between Internal Coordinates to Improve 3D Cartesian Coordinates for Proteins;Journal of Chemical Theory and Computation;2023-02-07

3. Local Backbone Geometry Plays a Critical Role in Determining Conformational Preferences of Amino Acid Residues in Proteins;Biomolecules;2022-08-26

4. In silico comprehensive analysis of coding and non-coding SNPs in human mTOR protein;PLOS ONE;2022-07-05

5. A complete Fourier-synthesis-based backbone-conformation-dependent library for proteins;Acta Crystallographica Section D Structural Biology;2021-02-01

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