Novel Genetic Loci in Early‐Onset Gout Derived From Whole‐Genome Sequencing of an Adolescent Gout Cohort

Author:

Ji Aichang1ORCID,Sui Yang2,Xue Xiaomei1ORCID,Ji Xiapeng1,Shi Wenrui2,Shi Yongyong3,Terkeltaub Robert4,Dalbeth Nicola5ORCID,Takei Riku6,Yan Fei1ORCID,Sun Mingshu7,Li Maichao1,Lu Jie1ORCID,Cui Lingling1,Liu Zhen1,Wang Can1ORCID,Li Xinde1,Han Lin1ORCID,Fang Zhanjie2ORCID,Sun Wenyan1ORCID,Liang Yue2,He Yuwei1ORCID,Zheng Guangmin2,Wang Xuefeng1,Wang Jiayi8,Zhang Hui9,Pang Lei1,Qi Han1ORCID,Li Yushuang1,Cheng Zan1,Li Zhiqiang10,Xiao Jingfa2,Zeng Changqing2,Merriman Tony R.11ORCID,Qu Hongzhu12,Fang Xiangdong12,Li Changgui13ORCID

Affiliation:

1. Affiliated Hospital of Qingdao University Qingdao China

2. China National Center for Bioinformation, Beijing Institute of Genomics, Chinese Academy of Sciences, and University of Chinese Academy of Sciences Beijing China

3. Affiliated Hospital of Qingdao University and Biomedical Sciences Institute of Qingdao University (Qingdao Branch of SJTU Bio‐X Institutes), Qingdao University, Qingdao, China, and Bio‐X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders (Ministry of Education), Collaborative Innovation Center for Brain Science, Shanghai Jiao Tong University Shanghai China

4. University of California San Diego School of Medicine La Jolla

5. University of Auckland Auckland New Zealand

6. Asia Pacific Gout Consortium and University of Alabama at Birmingham

7. Shandong Provincial Clinical Research Center for Immune Diseases and Gout & Shandong Provincial Key Laboratory of Metabolic Diseases, The Affiliated Hospital of Qingdao University Qingdao China

8. Development Center for Medical Science & Technology, National Health Commission of the People's Republic of China Beijing China

9. Institute of Metabolic Diseases, Qingdao University Qingdao China

10. The Biomedical Sciences Institute and The Affiliated Hospital of Qingdao University, Qingdao University Qingdao Shandong China

11. Asia Pacific Gout Consortium, University of Alabama at Birmingham, Institute of Metabolic Diseases, Qingdao University, Qingdao, China, and University of Otago Dunedin New Zealand

12. China National Center for Bioinformation, Beijing Institute of Genomics, Chinese Academy of Sciences, University of Chinese Academy of Sciences, and Beijing Key Laboratory of Genome and Precision Medicine Technologies Beijing China

13. The Affiliated Hospital of Qingdao University, Qingdao, China, Asia Pacific Gout Consortium, and Institute of Metabolic Diseases, Qingdao University Qingdao China

Abstract

ObjectiveMechanisms underlying the adolescent‐onset and early‐onset gout are unclear. This study aimed to discover variants associated with early‐onset gout.MethodsWe conducted whole‐genome sequencing in a discovery adolescent‐onset gout cohort of 905 individuals (gout onset 12 to 19 years) to discover common and low‐frequency single‐nucleotide variants (SNVs) associated with gout. Candidate common SNVs were genotyped in an early‐onset gout cohort of 2,834 individuals (gout onset ≤30 years old), and meta‐analysis was performed with the discovery and replication cohorts to identify loci associated with early‐onset gout. Transcriptome and epigenomic analyses, quantitative real‐time polymerase chain reaction and RNA sequencing in human peripheral blood leukocytes, and knock‐down experiments in human THP‐1 macrophage cells investigated the regulation and function of candidate gene RCOR1.ResultsIn addition to ABCG2, a urate transporter previously linked to pediatric‐onset and early‐onset gout, we identified two novel loci (Pmeta < 5.0 × 10−8): rs12887440 (RCOR1) and rs35213808 (FSTL5MIR4454). Additionally, we found associations at ABCG2 and SLC22A12 that were driven by low‐frequency SNVs. SNVs in RCOR1 were linked to elevated blood leukocyte messenger RNA levels. THP‐1 macrophage culture studies revealed the potential of decreased RCOR1 to suppress gouty inflammation.ConclusionThis is the first comprehensive genetic characterization of adolescent‐onset gout. The identified risk loci of early‐onset gout mediate inflammatory responsiveness to crystals that could mediate gouty arthritis. This study will contribute to risk prediction and therapeutic interventions to prevent adolescent‐onset gout.

Funder

National Key Research and Development Program of China

National Natural Science Foundation of China

Natural Science Foundation of Shandong Province

Publisher

Wiley

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