Eight years of weekly eDNA monitoring in the North‐Western Pacific

Author:

Sildever Sirje12ORCID,Nishi Noriko3,Tazawa Satoshi3,Kasai Hiromi4,Hirai Junya5,Shiomoto Akihiro6,Kikuchi Taisei78,Katakura Seiji9,Nagai Satoshi110

Affiliation:

1. Yokohama Field Station Fisheries Resources Institute, Japan Fisheries Research and Education Agency Yokohama Japan

2. Department of Marine Systems Tallinn University of Technology Tallinn Estonia

3. Axiohelix Co. Ltd Tokyo Japan

4. Kushiro Field Station Fisheries Resources Institute, Japan Fisheries Research and Education Agency Kushiro Japan

5. Atmosphere and Ocean Research Institute The University of Tokyo Chiba Japan

6. Department of Bioindustry Tokyo University of Agriculture Abashiri Japan

7. Department of Integrated Biosciences, Graduate School of Frontier Sciences The University of Tokyo Chiba Japan

8. Department of Infectious Diseases, Faculty of Medicine University of Miyazaki Miyazaki Japan

9. City of Mombetsu Mombetsu Japan

10. Yokohama Field Station Fisheries Technology Institute, Japan Fisheries Research and Education Agency Yokohama Japan

Abstract

AbstractDetection of marine organisms based on environmental DNA (eDNA) has expanded the knowledge of species richness, distribution, and appearance patterns. We used eDNA data from a single location sampled weekly over 8 years to detect as many species as possible, and investigate their appearance patterns and associations with biotic and abiotic factors. We detected >2500 operational taxonomic units (OTUs) associated with unique species from nine supergroups. The dominating currents that differ significantly in temperature, salinity, and nutrient concentrations structured the richness of the OTUs. We further detected sporadic and seasonal or continuous presence among the OTUs connected with a single species. This study shows that the long‐term eDNA‐based monitoring approach provides comprehensive knowledge of the species present as well as their associations with biotic and abiotic factors.

Funder

Eesti Teadusagentuur

European Regional Development Fund

Federal Railroad Administration

Japan Society for the Promotion of Science

Tokyo University of Agriculture

Publisher

Wiley

Subject

Genetics,Ecology,Ecology, Evolution, Behavior and Systematics

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