Ideal amino acid exchange forms for approximating substitution matrices-Reference-Cited by-同舟云学术

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Ideal amino acid exchange forms for approximating substitution matrices

Published:2007-11-01 Issue:2 Volume:69 Page:379-393
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Pokarowski Piotr,Kloczkowski Andrzej,Nowakowski Szymon,Pokarowska Maria,Jernigan Robert L.,Kolinski Andrzej

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Reference63 articles.

1. Inferring ideal amino acid interaction forms from statistical protein contact potentials;Pokarowski;Proteins: Struct Funct Bioinformatics,2005

2. Self-consistent estimation of inter-residue protein contact energies based on an equilibrium mixture approximation of residues;Miyazawa;Proteins: Struct Funct Genet,1999

3. A simple method for displaying the hydropathic character of a protein;Kyte;J Mol Biol,1982

4. Characterization of amino acid sequences in proteins by statistical methods;Zimmerman;J Theor Biol,1968

5. Are proteins ideal mixtures of amino acids-analysis of energy parameter sets;Godzik;Protein Sci,1995

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2. The Ancient Operational Code is Embedded in the Amino Acid Substitution Matrix and aaRS Phylogenies;Journal of Molecular Evolution;2019-11-28

3. How to ‘find’ an error minimized genetic code: neutral emergence as an alternative to direct Darwinian selection for evolutionary optimization;Natural Computing;2018-01-05

4. Amino acid interaction networks provide a new lens for therapeutic antibody discovery and anti-viral drug optimization;Current Opinion in Virology;2015-04

5. Amino Acid Properties Conserved in Molecular Evolution;PLoS ONE;2014-06-26

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