IMSPeptider: A computational peptide collision cross-section area calculator based on a novel molecular dynamics simulation protocol-Reference-Cited by-同舟云学术

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IMSPeptider: A computational peptide collision cross-section area calculator based on a novel molecular dynamics simulation protocol

Published:2013-06-20 Issue:20 Volume:34 Page:1707-1718
ISSN:0192-8651
Container-title:Journal of Computational Chemistry
language:en
Short-container-title:J. Comput. Chem.

Author:

de Carvalho Ranieri V.¹,Lopez-Ferrer Daniel²,Guimarães Katia S.¹,Lins Roberto D.³

Affiliation:

1. Center of Informatics; Federal University of Pernambuco; Recife; PE; 50740-560; Brazil

2. Caprion Proteomics US LCC; Menlo Park; California; 94025

3. Department of Fundamental Chemistry; Federal University of Pernambuco; Recife; PE; 50740-560; Brazil

Publisher

Wiley

Subject

Computational Mathematics,General Chemistry

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1002/jcc.23299/fullpdf

Reference44 articles.

1. Biomolecule Analysis by Ion Mobility Spectrometry

2. Ion mobility–mass spectrometry analysis of large protein complexes

3. Ion mobility spectrometry: a review. Part 1. Structural analysis by mobility measurement

4. Prediction of peptide ion mobilities via a priori calculations from intrinsic size parameters of amino acid residues

Cited by 5 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Ionmob: a Python package for prediction of peptide collisional cross-section values;Bioinformatics;2023-08-04

2. Deep learning approaches for data-independent acquisition proteomics;Expert Review of Proteomics;2021-12-02

3. Pep-Calc.com: a set of web utilities for the calculation of peptide and peptoid properties and automatic mass spectral peak assignment;Journal of Computer-Aided Molecular Design;2016-02-24

4. Effects of charge states, charge sites and side chain interactions on conformational preferences of a series of model peptide ions;The Analyst;2015

5. Ion collision crosssection measurements in quadrupole ion traps using a time–frequency analysis method;The Analyst;2014

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