Optimized bacterial DNA isolation method for microbiome analysis of human tissues-Reference-Cited by-同舟云学术

Optimized bacterial DNA isolation method for microbiome analysis of human tissues

Published:2021-06 Issue:3 Volume:10 Page:
ISSN:2045-8827
Container-title:MicrobiologyOpen
language:en
Short-container-title:MicrobiologyOpen

Author:

Bruggeling Carlijn E.¹^ORCID,Garza Daniel R.²³,Achouiti Soumia¹,Mes Wouter⁴⁵,Dutilh Bas E.²⁶^ORCID,Boleij Annemarie¹^ORCID

Affiliation:

1. Department of Pathology Radboud Institute for Molecular Life Sciences (RIMLS) Radboud University Medical Center (Radboudumc) Nijmegen The Netherlands

2. Radboud Institute for Molecular Life Sciences (RIMLS) Center for Molecular and Biomolecular Informatics (CMBI) Radboud University Medical Center (Radboudumc) Nijmegen The Netherlands

3. KU Leuven Department of Microbiology, Immunology and Transplantation Laboratory of Molecular Bacteriology Rega Institute Leuven Belgium

4. Department of Animal Ecology & Physiology Institute for Water and Wetland Research (IWWR) Radboud University Nijmegen The Netherlands

5. Department of Microbiology Institute for Water and Wetland Research (IWWR) Radboud University Nijmegen The Netherlands

6. Theoretical Biology and Bioinformatics Science for Life Utrecht University Utrecht The Netherlands

Funder

KWF Kankerbestrijding

Publisher

Wiley

Subject

Microbiology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/mbo3.1191

Reference49 articles.

1. Gut microbiome compositional and functional differences between tumor and non-tumor adjacent tissues from cohorts from the US and Spain

2. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations

3. Improvement of phylum- and class-specific primers for real-time PCR quantification of bacterial taxa

4. Colonic mucosal microbiome differs from stool microbiome in cirrhosis and hepatic encephalopathy and is linked to cognition and inflammation

5. Deep Sequencing Analyses of Low Density Microbial Communities: Working at the Boundary of Accurate Microbiota Detection

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