Cryo‐EM structure of the inactive ribosome complex accumulated in chick embryo cells in cold‐stress conditions

Author:

Nurullina Liliia1ORCID,Terrosu Salvatore1ORCID,Myasnikov Alexander G.2,Jenner Lasse Bohl1,Yusupov Marat13ORCID

Affiliation:

1. Integrated Structural Biology, IGBMC – IGBMC – CNRS UMR 7104 Inserm France

2. Dubochet Center for Imaging (DCI), EPFL Lausanne Switzerland

3. Regulatory Genomics Research Center, Institute of Fundamental Medicine and Biology Kazan Federal University Russia

Abstract

Here, we present the high‐resolution structure of the Gallus gallus 80S ribosome obtained from cold‐treated chicken embryos. The translationally inactive ribosome complex contains elongation factor eEF2 with GDP, SERPINE1 mRNA binding protein 1 (SERBP1) and deacylated tRNA in the P/E position, showing common features with complexes already described in mammals. Modeling of most expansion segments of G. gallus 28S ribosomal RNA allowed us to identify specific features in their structural organization and to describe areas where a marked difference between mammalian and avian ribosomes could shed light on the evolution of the expansion segments. This study provides the first structure of an avian ribosome, establishing a model for future structural and functional studies on the translational machinery in Aves.

Funder

College of Natural Resources and Sciences, Humboldt State University

Ministry of Science and Higher Education of the Russian Federation

Publisher

Wiley

Reference40 articles.

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2. The structure of the eukaryotic ribosome at 3.0 Å resolution – PubMed. Available:https://pubmed.ncbi.nlm.nih.gov/22096102/. [Accessed: 11‐May‐2023].

3. The Structure and Function of the Eukaryotic Ribosome

4. Ribosome crystallization in homogenates and cell extracts of chick embryos

5. Location of exit channel for nascent protein in 80S ribosome

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