Ensemble MD simulations restrained via crystallographic data: Accurate structure leads to accurate dynamics
Author:
Affiliation:
1. Department of Chemistry; Purdue University; 560 Oval Drive West Lafayette Indiana 47907-2084, USA
2. Laboratory of Biomolecular NMR; St. Petersburg State University; St. Petersburg 199034 Russia
Funder
NSF grant
Publisher
Wiley
Subject
Molecular Biology,Biochemistry
Link
http://onlinelibrary.wiley.com/wol1/doi/10.1002/pro.2433/fullpdf
Reference99 articles.
1. Refinement of protein structure homology models via long, all-atom molecular dynamics simulations;Raval;Proteins,2012
2. 2.1 and 1.8 angstrom average Cα RMSD structure predictions on two small proteins, HP-36 and S15;Lee;J Am Chem Soc,2001
3. Refinement of homology-based protein structures by molecular dynamics simulation techniques;Fan;Protein Sci,2004
4. How fast-folding proteins fold;Lindorff-Larsen;Science,2011
5. Molecular dynamics in the endgame of protein structure prediction;Lee;J Mol Biol,2001
Cited by 23 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
1. Functional protein dynamics in a crystal;Nature Communications;2024-04-15
2. X-ray Crystallography Module in MD Simulation Program Amber 2023. Refining the Models of Protein Crystals;Journal of Chemical Information and Modeling;2023-12-26
3. Functional Protein Dynamics in a Crystal;2023-07-07
4. MD simulations of macromolecular crystals: Implications for the analysis of Bragg and diffuse scattering;Methods in Enzymology;2023
5. Molecular-dynamics simulations of macromolecular diffraction, part I: Preparation of protein crystal simulations;Methods in Enzymology;2023
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3