Discovery of the First‐in‐Class Inhibitors of Hypoxia Up‐Regulated Protein 1 (HYOU1) Suppressing Pathogenic Fibroblast Activation

Author:

Papadopoulou Dimitra1,Mavrikaki Vasiliki23,Charalampous Filippos1,Tzaferis Christos1,Samiotaki Martina1,Papavasileiou Konstantinos D.456,Afantitis Antreas456,Karagianni Niki7,Denis Maria C.7,Sanchez Julie89,Lane J. Robert89,Faidon Brotzakis Zacharias101,Skretas Georgios111,Georgiadis Dimitris3,Matralis Alexios N.1ORCID,Kollias George11213

Affiliation:

1. Institute for Bioinnovation Biomedical Sciences Research Center “Alexander Fleming” 16672 Vari Greece

2. Institute for Bioinnovation Biomedical Sciences Research Center “Alexander Fleming” Vari 16672 Athens Greece

3. Department of Chemistry Laboratory of Organic Chemistry National and Kapodistrian University of Athens 15784 Athens Greece

4. Department of ChemoInformatics Novamechanics Ltd. 1070 Nicosia Cyprus

5. Department of Chemoinformatics Novamechanics MIKE 18545 Piraeus Greece

6. Division of Data Driven Innovation Entelos Institute 6059 Larnaca Cyprus

7. Biomedcode Hellas S.A. 16672 Vari Greece

8. Division of Physiology Pharmacology and Neuroscience School of Life Sciences Queen's Medical Centre University of Nottingham NG7 2UH Nottingham U.K.

9. Centre of Membrane Proteins and Receptors Universities of Birmingham and Nottingham NG2 7AG Midlands U.K.

10. Centre for Misfolding Diseases Yusuf Hamied Department of Chemistry University of Cambridge Cambridge CB2 1EW U.K.

11. Institute of Chemical Biology National Hellenic Research Foundation 11635 Athens Greece

12. Department of Physiology Medical School National and Kapodistrian University of Athens 11527 Athens Greece

13. Research Institute of New Biotechnologies and Precision Medicine National and Kapodistrian University of Athens 11527 Athens Greece

Abstract

AbstractFibroblasts are key regulators of inflammation, fibrosis, and cancer. Targeting their activation in these complex diseases has emerged as a novel strategy to restore tissue homeostasis. Here, we present a multidisciplinary lead discovery approach to identify and optimize small molecule inhibitors of pathogenic fibroblast activation. The study encompasses medicinal chemistry, molecular phenotyping assays, chemoproteomics, bulk RNA‐sequencing analysis, target validation experiments, and chemical absorption, distribution, metabolism, excretion and toxicity (ADMET)/pharmacokinetic (PK)/in vivo evaluation. The parallel synthesis employed for the production of the new benzamide derivatives enabled us to a) pinpoint key structural elements of the scaffold that provide potent fibroblast‐deactivating effects in cells, b) discriminate atoms or groups that favor or disfavor a desirable ADMET profile, and c) identify metabolic “hot spots”. Furthermore, we report the discovery of the first‐in‐class inhibitor leads for hypoxia up‐regulated protein 1 (HYOU1), a member of the heat shock protein 70 (HSP70) family often associated with cellular stress responses, particularly under hypoxic conditions. Targeting HYOU1 may therefore represent a potentially novel strategy to modulate fibroblast activation and treat chronic inflammatory and fibrotic disorders.

Funder

General Secretariat for Research and Technology

European Research Council

Stavros Niarchos Foundation

Publisher

Wiley

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