Discovery of the Azaserine Biosynthetic Pathway Uncovers a Biological Route for α‐Diazoester Production

Author:

Van Cura Devon1ORCID,Ng Tai L.1,Huang Jing23,Hager Harry1ORCID,Hartwig John F.4ORCID,Keasling Jay D.23567ORCID,Balskus Emily P.18ORCID

Affiliation:

1. Department of Chemistry and Chemical Biology Harvard University Cambridge, MA USA

2. Biological Systems and Engineering Division Lawrence Berkeley National Laboratory Berkeley, CA USA

3. Joint BioEnergy Institute Lawrence Berkeley National Laboratory Emeryville, CA USA

4. Department of Chemistry University of California, Berkeley Berkeley, CA USA

5. Department of Chemical and Biomolecular Engineering University of California, Berkeley Berkeley, CA USA

6. Synthetic Biochemistry Center Institute for Synthetic Biology Shenzhen Institute for Advanced Technologies Shenzhen China

7. Center for Biosustainability Danish Technical University Lyngby Denmark

8. Howard Hughes Medical Institute Harvard University Cambridge, MA USA

Abstract

AbstractAzaserine is a bacterial metabolite containing a biologically unusual and synthetically enabling α‐diazoester functional group. Herein, we report the discovery of the azaserine (aza) biosynthetic gene cluster from Glycomyces harbinensis. Discovery of related gene clusters reveals previously unappreciated azaserine producers, and heterologous expression of the aza gene cluster confirms its role in azaserine assembly. Notably, this gene cluster encodes homologues of hydrazonoacetic acid (HYAA)‐producing enzymes, implicating HYAA in α‐diazoester biosynthesis. Isotope feeding and biochemical experiments support this hypothesis. These discoveries indicate that a 2‐electron oxidation of a hydrazonoacetyl intermediate is required for α‐diazoester formation, constituting a distinct logic for diazo biosynthesis. Uncovering this biological route for α‐diazoester synthesis now enables the production of a highly versatile carbene precursor in cells, facilitating approaches for engineering complete carbene‐mediated biosynthetic transformations in vivo.

Funder

National Science Foundation

National Institutes of Health

Howard Hughes Medical Institute

U.S. Department of Energy

Publisher

Wiley

Subject

General Medicine

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