SearcHPV: A novel approach to identify and assemble human papillomavirus–host genomic integration events in cancer-Reference-Cited by-同舟云学术

SearcHPV: A novel approach to identify and assemble human papillomavirus–host genomic integration events in cancer

Published:2021-06-23 Issue:19 Volume:127 Page:3531-3540
ISSN:0008-543X
Container-title:Cancer
language:en
Short-container-title:Cancer

Author:

Pinatti Lisa M.¹²,Gu Wenjin³,Wang Yifan⁴,Elhossiny Ahmed³,Bhangale Apurva D.²,Brummel Collin V.²,Carey Thomas E.¹²⁵⁶,Mills Ryan E.³⁴^ORCID,Brenner J. Chad²⁵⁶^ORCID

Affiliation:

1. Cancer Biology Program Program in the Biomedical Sciences Rackham Graduate School University of Michigan Ann Arbor Michigan

2. Department of Otolaryngology/Head and Neck Surgery University of Michigan Ann Arbor Michigan

3. Department of Computational Medicine and Bioinformatics University of Michigan Ann Arbor Michigan

4. Department of Human Genetics University of Michigan Ann Arbor Michigan

5. Rogel Cancer Center Michigan Medicine Ann Arbor Michigan

6. Department of Pharmacology University of Michigan Ann Arbor Michigan

Funder

University of Michigan

Publisher

Wiley

Subject

Cancer Research,Oncology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/cncr.33691

Reference44 articles.

1. Whole genome sequencing reveals complexity in both HPV sequences present and HPV integrations in HPV-positive oropharyngeal squamous cell carcinomas

2. Analysis of The Cancer Genome Atlas sequencing data reveals novel properties of the human papillomavirus 16 genome in head and neck squamous cell carcinoma

3. Characterization of HPV and host genome interactions in primary head and neck cancers

4. Association of human papillomavirus integration with better patient outcomes in oropharyngeal squamous cell carcinoma

5. Risk stratification of cervical lesions using capture sequencing and machine learning method based on HPV and human integrated genomic profiles

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