A protein-RNA docking benchmark (II): Extended set from experimental and homology modeling data-Reference-Cited by-同舟云学术

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A protein-RNA docking benchmark (II): Extended set from experimental and homology modeling data

Published:2012-05-08 Issue:7 Volume:80 Page:1872-1882
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Pérez-Cano Laura,Jiménez-García Brian,Fernández-Recio Juan

Funder

Plan Nacional I+D+i from the Spanish Ministry of Science

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1002/prot.24075/fullpdf

Reference33 articles.

1. Present and future challenges and limitations in protein-protein docking;Pons;Proteins,2010

2. Principles of flexible protein-protein docking;Andrusier;Proteins,2008

3. Prediction of protein-protein interactions by docking methods;Smith;Curr Opin Struct Biol,2002

4. Principles of docking: an overview of search algorithms and a guide to scoring functions;Halperin;Proteins,2002

5. The targets of CAPRI Rounds 13-19;Janin;Proteins,2010

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1. Dynamics of Protein–RNA Interfaces Using All-Atom Molecular Dynamics Simulations;The Journal of Physical Chemistry B;2024-05-13

2. A Graph Method for Predicting Protein-RNA Interaction Using Reduced Amino Acid Alphabets;2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM);2023-12-05

3. The dynamics of protein-RNA interfaces using all-atom molecular dynamics simulations;2023-11-08

4. Challenges in structural modeling of RNA-protein interactions;Current Opinion in Structural Biology;2023-08

5. Internal Normal Mode Analysis Applied to RNA Flexibility and Conformational Changes;Journal of Chemical Information and Modeling;2023-03-27

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