DisCovER : distance‐ and orientation‐based covariational threading for weakly homologous proteins-Reference-Cited by-同舟云学术

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DisCovER : distance‐ and orientation‐based covariational threading for weakly homologous proteins

Published:2021-10-11 Issue:2 Volume:90 Page:579-588
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Bhattacharya Sutanu¹,Roche Rahmatullah²,Moussad Bernard²,Bhattacharya Debswapna²^ORCID

Affiliation:

1. Department of Computer Science Florida Polytechnic University Lakeland Florida USA

2. Department of Computer Science Virginia Tech Blacksburg Virginia USA

Funder

Division of Biological Infrastructure

Division of Information and Intelligent Systems

National Institute of General Medical Sciences

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/prot.26254

Reference51 articles.

1. The Protein-Folding Problem, 50 Years On

2. The Protein Data Bank

3. Protein homology detection by HMM-HMM comparison

4. MUSTER: Improving protein sequence profile-profile alignments by using multiple sources of structure information

5. Improving protein fold recognition and template-based modeling by employing probabilistic-based matching between predicted one-dimensional structural properties of query and corresponding native properties of templates

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1. Single-sequence protein-RNA complex structure prediction by geometric attention-enabled pairing of biological language models;2024-07-28

2. PLMSearch: Protein language model powers accurate and fast sequence search for remote homology;Nature Communications;2024-03-30

3. An interactive visualization tool for educational outreach in protein contact map overlap analysis;Frontiers in Bioinformatics;2024-03-15

4. Recent Progress of Protein Tertiary Structure Prediction;Molecules;2024-02-13

5. Integrating deep learning, threading alignments, and a multi‐MSA strategy for high‐quality protein monomer and complex structure prediction in CASP15;Proteins: Structure, Function, and Bioinformatics;2023-08-31

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