Landscape of protein-small ligand binding modes-Reference-Cited by-同舟云学术

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Landscape of protein-small ligand binding modes

Published:2016-07-04 Issue:9 Volume:25 Page:1659-1671
ISSN:0961-8368
Container-title:Protein Science
language:en
Short-container-title:Protein Science

Author:

Kasahara Kota¹,Kinoshita Kengo²³⁴

Affiliation:

1. College of Life Sciences; Ritsumeikan University; Kusatsu Shiga 525-8577 Japan

2. Graduate School of Information Sciences; Tohoku University; Sendai Miyagi 980-8597 Japan

3. Tohoku Medical Megabank Organization; Tohoku University; Sendai Miyagi 980-8573 Japan

4. Institute of Development, Aging and Cancer, Tohoku University; Sendai Miyagi 980-8575 Japan

Funder

Japan Society for the Promotion of Science

Human Genome Center (The Univ. of Tokyo) and the National Institute of Genetics, Research Organization of Informatics and Systems, Japan

Publisher

Wiley

Subject

Molecular Biology,Biochemistry

Reference37 articles.

1. The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data;Berman;Nucleic Acids Res,2007

2. From structure to function: approaches and limitations;Thornton;Nat Struct Biol,2000

3. Protein informatics towards function identification;Kinoshita;Curr Opin Struct Biol,2003

4. When fold is not important: a common structural framework for adenine and AMP binding in 12 unrelated protein families;Denessiouk;Proteins,2000

5. Adenine recognition: a motif present in ATP-, CoA-, NAD-, NADP-, and FAD-dependent proteins;Denessiouk;Proteins,2001

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1. Decision Making in Structure-Based Drug Discovery: Visual Inspection of Docking Results;Journal of Medicinal Chemistry;2021-02-22

2. Homogeneous label-free protein binding assay using small-molecule-labeled DNA nanomachine with DNAzyme-Based chemiluminescence detection;Talanta;2020-01

3. Ranking Enzyme Structures in the PDB by Bound Ligand Similarity to Biological Substrates;Structure;2018-04

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