Best practices for user consultation in flow cytometry shared resource laboratories

Author:

Asosingh Kewal1,Bayiyana Alice2,Black Michele C.3,Chakraborty Uttara4,Clemente Michael J.5,Graham Amy C.6,Gregory Michael D.7,Hogg Karen G.8,Van Isterdael Gert9ORCID,Liu ChunChun10,Martínez Lola11,Petersen Charlotte C.12,Porat Ziv13ORCID,Price Kylie M.14ORCID,Prickett Laura B.15,Rieger Aja M.16,Roe Caroline E.17,Smit Erica18

Affiliation:

1. Cleveland Clinic Lerner Research Institute Flow Cytometry SRL Cleveland United States

2. Immunology Laboratory‐Flow cytometry core Makerere University College of Health Sciences Kampala Uganda

3. Flow Cytometry Core Fred Hutchinson Cancer Center Washington USA

4. Manipal Institute of Regenerative Medicine, Bengaluru Manipal Academy of Higher Education Manipal Karnataka India

5. Flow Cytometry and Imaging Core, Department of Investigative Medicine Western Michigan University Homer Stryker M.D. School of Medicine Kalamazoo Michigan USA

6. Robert J. Tomsich Department of Pathology & Laboratory Medicine, Diagnostics Institute, Clinical Flow Cytometry Cleveland Clinic Cleveland Ohio USA

7. Flow Cytometry and Cell Sorting Facility California Institute of Technology California USA

8. Bioscience Technology Facility University of York York UK

9. VIB Flow Core, VIB Center for Inflammation Research, Department of Biomedical Molecular Biology Ghent University Ghent Belgium

10. Cell Function Analyzing Facility, Technology Center Tsinghua University Beijing China

11. Flow Cytometry Core Unit Spanish National Cancer Research Center (CNIO) Madrid Spain

12. The FACS Core Facility Aarhus University Aarhus Denmark

13. Life Sciences Core Facilities Weizmann Institute of Science Rehovot Israel

14. Hugh Green Cytometry Centre Malaghan Institute of Medical Research Wellington New Zealand

15. Flow Cytometry Site Lead Oncology R&D, AstraZeneca Waltham Massachusetts USA

16. University of Alberta Faculty of Medicine and Dentistry Edmonton Canada

17. Department of Cell and Developmental Biology Vanderbilt University Nashville Tennessee USA

18. School of Medicine, Cape Town HVTN Immunology Laboratory (CHIL) HCRISA Cape Town South Africa

Abstract

AbstractThis “Best Practices in User Consultation” article is the result of a 2022 International Society for the Advancement of Cytometry (ISAC) membership survey that collected valuable insights from the shared research laboratory (SRL) community and of a group discussion at the CYTO 2022 workshop of the same name. One key takeaway is the importance of initiating a consultation at the outset of a flow cytometry project, particularly for trainees. This approach enables the improvement and standardization of every step, from planning experiments to interpreting data. This proactive approach effectively mitigates experimental bias and avoids superfluous trial and error, thereby conserving valuable time and resources. In addition to guidelines, the optimal approaches for user consultation specify communication channels, methods, and critical information, thereby establishing a structure for productive correspondence between SRL and users. This framework functions as an exemplar for establishing robust and autonomous collaborative relationships. User consultation adds value by providing researchers with the necessary information to conduct reproducible flow cytometry experiments that adhere to scientific rigor. By following the steps, instructions, and strategies outlined in these best practices, an SRL can readily tailor them to its own setting, establishing a personalized workflow and formalizing user consultation services. This article provides a pragmatic guide for improving the caliber and efficacy of flow cytometry research and aggregates the flow cytometry SRL community's collective knowledge regarding user consultation.

Publisher

Wiley

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