Real‐time intelligent classification of COVID‐19 and thrombosis via massive image‐based analysis of platelet aggregates

Author:

Zhang Chenqi1,Herbig Maik1ORCID,Zhou Yuqi1ORCID,Nishikawa Masako2,Shifat‐E‐Rabbi Mohammad3,Kanno Hiroshi1,Yang Ruoxi1,Ibayashi Yuma1,Xiao Ting‐Hui1ORCID,Rohde Gustavo K.34,Sato Masataka5,Kodera Satoshi5,Daimon Masao2,Yatomi Yutaka2,Goda Keisuke1678

Affiliation:

1. Department of Chemistry The University of Tokyo Tokyo Japan

2. Department of Clinical Laboratory University of Tokyo Hospital Tokyo Japan

3. Department of Biomedical Engineering University of Virginia Charlottesville Virginia USA

4. Department of Electrical and Computer Engineering University of Virginia Charlottesville Virginia USA

5. Department of Cardiovascular Medicine The University of Tokyo Hospital Tokyo Japan

6. Department of Bioengineering University of California Los Angeles California USA

7. CYBO Tokyo Japan

8. Institute of Technological Sciences Wuhan University Hubei China

Abstract

AbstractMicrovascular thrombosis is a typical symptom of COVID‐19 and shows similarities to thrombosis. Using a microfluidic imaging flow cytometer, we measured the blood of 181 COVID‐19 samples and 101 non‐COVID‐19 thrombosis samples, resulting in a total of 6.3 million bright‐field images. We trained a convolutional neural network to distinguish single platelets, platelet aggregates, and white blood cells and performed classical image analysis for each subpopulation individually. Based on derived single‐cell features for each population, we trained machine learning models for classification between COVID‐19 and non‐COVID‐19 thrombosis, resulting in a patient testing accuracy of 75%. This result indicates that platelet formation differs between COVID‐19 and non‐COVID‐19 thrombosis. All analysis steps were optimized for efficiency and implemented in an easy‐to‐use plugin for the image viewer napari, allowing the entire analysis to be performed within seconds on mid‐range computers, which could be used for real‐time diagnosis.

Funder

Japan Agency for Medical Research and Development

Japan Society for the Promotion of Science

Konica Minolta Imaging Science Foundation

Nakatani Foundation for Advancement of Measuring Technologies in Biomedical Engineering

National Institutes of Health

National Science Foundation

Ogasawara Foundation

Publisher

Wiley

Subject

Cell Biology,Histology,Pathology and Forensic Medicine

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1. 高速光流控成像研究进展(特邀);Laser & Optoelectronics Progress;2024

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