A new computational approach, based on images trajectories, to identify the subjacent heterogeneity of sperm to the effects of ketanserin

Author:

Rodríguez‐Martínez Eder Alejandro1,Rivas Cindy U.2,Ayala María E.3,Blanco‐Rodríguez Rodolfo45,Juarez Nancy2,Hernandez‐Vargas Esteban A.45,Aragón Andrés2ORCID

Affiliation:

1. UR7516 CHIMERE Laboratory University of Picardie Jules Verne Amiens France

2. Laboratorio de Gametos y Desarrollo Tecnológico Facultad de Estudios Superiores Iztacala, UNAM 54090 Tlalnepantla Estado de México Mexico

3. Unidad de Biología de la Reproducción Laboratorio de pubertad, Facultad de Estudios Superiores Zaragoza, UNAM Ciudad de México 15000 Mexico

4. Department of Mathematics and Statistical Science University of Idaho Moscow Idaho USA

5. Institute for Modeling Collaboration and Innovation University of Idaho Moscow Idaho USA

Abstract

AbstractThe identification of kinematic subpopulations is of paramount importance to understanding the biological nature of the sperm heterogeneity. Nowadays, the data of motility parameters obtained by a computer‐assisted sperm analysis (CASA) system has been used as input to distinct algorithms to identify kinematic subpopulations. In contrast, the images of the trajectories were depicted only as examples of the patterns of motility in each subpopulation. Here, python code was written to reconstruct the images of trajectories, from their coordinates, then the images of trajectories were used as input to a machine learning clustering algorithm of classification, and the subpopulations were described statistically by the motility parameters. Finally, the images of trajectories in each subpopulation were displayed in a way we called Pollock plots. Semen samples of boar sperm were treated with distinct concentrations of ketanserin (an antagonist of the 5‐HT2 receptor of serotonin) and untreated samples were used as a control. The motility of sperm in each sample was analyzed at 0 and 30 min of incubation. Six subpopulations were found. The subpopulation 2 presented the highest values of velocities at 0 or 30 min. After 30 min of incubation, the ketanserin increased the values of the curvilinear velocity at high concentrations, whereas the linearity and the straight velocity decreased. Our computational model permits better identification of the kinematic subpopulations than the traditional approach and provides insights onto the heterogeneity of the response to ketanserin; thus, it could significantly impact the research on the relationship between sperm heterogeneity‐fertility.

Funder

Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México

Publisher

Wiley

Subject

Cell Biology,Histology,Pathology and Forensic Medicine

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3