Affiliation:
1. Molecular Plasmonics work group Department of Nanobiophotonics Leibniz Institute of Photonic Technology Albert‐Einstein‐Strasse 9 07745 Jena Germany
2. Leibniz Institute of Photonic Technology Member of Leibniz Research Alliance Health Technologies and Member of the Leibniz Centre for Photonics in Infection Research (LPI) Albert‐Einstein‐Strasse 9 07745 Jena Germany
3. Institute for Infectious Diseases and Infection Control Jena University Hospital Am Klinikum 1 07747 Jena Germany
4. Leibniz Institute of Photonic Technology e.V. Member of the Leibniz Centre for Photonics in Infection Research (LPI) Albert‐Einstein‐Strasse 9 07745 Jena Germany
Abstract
AbstractThe development of rapid, simple, and accurate bioassays for the detection of nucleic acids has received increasing demand in recent years. Here, localized surface plasmon resonance (LSPR) spectroscopy for the detection of an antimicrobial resistance gene, sulfhydryl variable β‐lactamase (blaSHV), which confers resistance against a broad spectrum of β‐lactam antibiotics is used. By performing limit of detection experiments, a 23 nucleotide (nt) long deoxyribonucleic acid (DNA) sequence down to 25 nm was detected, whereby the signal intensity is inversely correlated with sequence length (23, 43, 63, and 100 nt). In addition to endpoint measurements of hybridization events, the setup also allowed to monitor the hybridization events in real‐time, and consequently enabled to extract kinetic parameters of the studied binding reaction. Performing LSPR measurements using single nucleotide polymorphism (SNP) variants of blaSHV revealed that these sequences can be distinguished from the fully complementary sequence. The possibility to distinguish such sequences is of utmost importance in clinical environments, as it allows to identify mutations essential for enzyme function and thus, is crucial for the correct treatment with antibiotics. Taken together, this system provides a robust, label‐free, and cost‐efficient analytical tool for the detection of nucleic acids and will enable the surveillance of antimicrobial resistance determinants.
Funder
European Regional Development Fund
Subject
Biomaterials,Biotechnology,General Materials Science,General Chemistry