HSV‐1 ICP0 dimer domain adopts a novel β‐barrel fold

Author:

McCloskey Erick1,Kashipathy Maithri2,Cooper Anne3,Gao Philip3,Johnson David K.4,Battaile Kevin P.5,Lovell Scott2,Davido David J.1

Affiliation:

1. Department of Molecular Biosciences University of Kansas Lawrence Kansas USA

2. Protein Structure and X‐Ray Crystallography Laboratory University of Kansas Lawrence Kansas USA

3. Protein Production Group University of Kansas Lawrence Kansas USA

4. Chemical Computational Biology Core University of Kansas Lawrence Kansas USA

5. NYX New York Structural Biology Center Upton New York USA

Abstract

AbstractInfected cell protein 0 (ICP0) is an immediate‐early regulatory protein of herpes simplex virus 1 (HSV‐1) that possesses E3 ubiquitin ligase activity. ICP0 transactivates viral genes, in part, through its C‐terminal dimer domain (residues 555–767). Deletion of this dimer domain results in reduced viral gene expression, lytic infection, and reactivation from latency. Since ICP0's dimer domain is associated with its transactivation activity and efficient viral replication, we wanted to determine the structure of this specific domain. The C‐terminus of ICP0 was purified from bacteria and analyzed by X‐ray crystallography to solve its structure. Each subunit or monomer in the ICP0 dimer is composed of nine β‐strands and two α‐helices. Interestingly, two adjacent β‐strands from one monomer “reach” into the adjacent subunit during dimer formation, generating two β‐barrel‐like structures. Additionally, crystallographic analyses indicate a tetramer structure is formed from two β‐strands of each dimer, creating a “stacking” of the β‐barrels. The structural protein database searches indicate the fold or structure adopted by the ICP0 dimer is novel. The dimer is held together by an extensive network of hydrogen bonds. Computational analyses reveal that ICP0 can either form a dimer or bind to SUMO1 via its C‐terminal SUMO‐interacting motifs but not both. Understanding the structure of the dimer domain will provide insights into the activities of ICP0 and, ultimately, the HSV‐1 life cycle.

Funder

University of Kansas

National Institutes of Health

U.S. Department of Energy

Industrial Macromolecular Crystallography Association Collaborative Access Team

National Institute of General Medical Sciences

Publisher

Wiley

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