Analytical assay validation for acute myeloid leukemia measurable residual disease assessment by multiparametric flow cytometry

Author:

Tettero Jesse M.12ORCID,Dakappagari Naveen3,Heidinga Maaike E.12,Oussoren‐Brockhoff Yvonne12,Hanekamp Diana124,Pahuja Anil3,Burns Kerri3,Kaur Pavinder3,Alfonso Zeni3,van der Velden Vincent H. J.5ORCID,te Marvelde Jeroen G.5,Hobo Willemijn6,Slomp Jennichjen7,Bachas Costa12ORCID,Kelder Angele12,Nguyen Kevin3,Cloos Jacqueline12ORCID

Affiliation:

1. Department of Hematology, Amsterdam UMC Vrije Universiteit Amsterdam Amsterdam The Netherlands

2. Cancer Center Amsterdam Imaging and Biomarkers Amsterdam The Netherlands

3. Navigate BioPharma (a Novartis Subsidiary) Carlsbad California USA

4. Department of Hematology, Erasmus MC Cancer Institute University Medical Center Rotterdam Rotterdam The Netherlands

5. Department of Immunology, Erasmus MC University Medical Center Rotterdam Rotterdam The Netherlands

6. Department of Laboratory Medicine—Laboratory of Hematology Radboud University Medical Center Nijmegen The Netherlands

7. Department of Clinical Chemistry Medisch Spectrum Twente/Medlon Enschede The Netherlands

Abstract

AbstractBackgroundMeasurable residual disease (MRD) assessed by multiparametric flow cytometry (MFC) has gained importance in clinical decision‐making for acute myeloid leukemia (AML) patients. However, complying with the recent In Vitro Diagnostic Regulations (IVDR) in Europe and Food and Drug Administration (FDA) guidance in the United States requires rigorous validation prior to their use in investigational clinical trials and diagnostics. Validating AML MRD‐MFC assays poses challenges due to the unique underlying disease biology and paucity of patient specimens. In this study, we describe an experimental framework for validation that meets regulatory expectations.MethodsOur validation efforts focused on evaluating assay accuracy, analytical specificity, analytical and functional sensitivity (limit of blank (LoB), detection (LLoD) and quantitation (LLoQ)), precision, linearity, sample/reagent stability and establishing the assay background frequencies.ResultsCorrelation between different MFC methods was highly significant (r = 0.99 for %blasts and r = 0.93 for %LAIPs). The analysis of LAIP specificity accurately discriminated from negative control cells. The assay demonstrated a LoB of 0.03, LLoD of 0.04, and LLoQ of 0.1%. Precision experiments yielded highly reproducible results (Coefficient of Variation <20%). Stability experiments demonstrated reliable measurement of samples up to 96 h from collection. Furthermore, the reference range of LAIP frequencies in non‐AML patients was below 0.1%, ranging from 0.0% to 0.04%.ConclusionIn this manuscript, we present the validation of an AML MFC‐MRD assay using BM/PB patient specimens, adhering to best practices. Our approach is expected to assist other laboratories in expediting their validation activities to fulfill recent health authority guidelines.

Funder

KWF Kankerbestrijding

Navigate BioPharma

Publisher

Wiley

Subject

Cell Biology,Histology,Pathology and Forensic Medicine

Reference36 articles.

1. Limit of blank, limit of detection and limit of quantitation;Armbruster D. A.;The Clinical Biochemist Reviews,2008

2. The Prognostic Significance of Measurable (“Minimal”) Residual Disease in Acute Myeloid Leukemia

3. Comprehensive protocol to sample and process bone marrow for measuring measurable residual disease and leukemic stem cells in acute myeloid leukemia;Cloos J.;Journal of Visualized Experiments: JoVE,2018

4. Implementation of erythroid lineage analysis by flow cytometry in diagnostic models for myelodysplastic syndromes

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