ICO Amplicon NGS Data Analysis: A Web Tool for Variant Detection in Common High-Risk Hereditary Cancer Genes Analyzed by Amplicon GS Junior Next-Generation Sequencing-Reference-Cited by-同舟云学术

ICO Amplicon NGS Data Analysis: A Web Tool for Variant Detection in Common High-Risk Hereditary Cancer Genes Analyzed by Amplicon GS Junior Next-Generation Sequencing

Published:2013-12-06 Issue:3 Volume:35 Page:271-277
ISSN:1059-7794
Container-title:Human Mutation
language:en
Short-container-title:Human Mutation

Author:

Lopez-Doriga Adriana¹²,Feliubadaló Lídia¹,Menéndez Mireia¹,Lopez-Doriga Sergio³,Morón-Duran Francisco D.²,del Valle Jesús¹,Tornero Eva¹,Montes Eva¹,Cuesta Raquel¹,Campos Olga¹,Gómez Carolina¹,Pineda Marta¹,González Sara¹,Moreno Victor²,Capellá Gabriel¹,Lázaro Conxi¹

Affiliation:

1. Hereditary Cancer Program; Catalan Institute of Oncology; L'Hospitalet de Llobregat; Barcelona Spain

2. Prevention Program; Catalan Institute of Oncology (ICO-IDIBELL); L'Hospitalet de Llobregat; Barcelona Spain

3. Facultat d'Ingenieria Industrial; Universitat Politècnica de Catalunya (UPC); Barcelona Spain

Publisher

Wiley

Subject

Genetics (clinical),Genetics

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1002/humu.22484/fullpdf

Reference13 articles.

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2. Analysing 454 amplicon resequencing experiments using the modular and database oriented Variant Identification Pipeline;De Schrijver;BMC Bioinformatics,2010

3. Next-generation sequencing meets genetic diagnostics: development of a comprehensive workflow for the analysis of BRCA1 and BRCA2 genes;Feliubadaló;Eur J Hum Genet,2013

4. VarScan: variant detection in massively parallel sequencing of individual and pooled samples;Koboldt;Bioinformatics,2009

5. Integrating next-generation sequencing into the diagnostic testing of inherited cancer predisposition;Ku;Clin Genet,2013

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1. High-frequency, low-coverage “false positives” mutations may be true in GS Junior sequencing studies;Scientific Reports;2017-10-23

2. Identification of novel SNPs in differentially expressed genes and its association with horn cancer of Bos indicus bullocks by next-generation sequencing;3 Biotech;2016-01-27