Predicting fragment intensities and retention time of iTRAQ‐ and TMTPro‐labeled peptides with Prosit‐TMT-Reference-Cited by-同舟云学术

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Predicting fragment intensities and retention time of iTRAQ‐ and TMTPro‐labeled peptides with Prosit‐TMT

Published:2022-05-24 Issue:19-20 Volume:22 Page:2100257
ISSN:1615-9853
Container-title:PROTEOMICS
language:en
Short-container-title:Proteomics

Author:

Gabriel Wassim¹^ORCID,Giurcoiu Victor¹^ORCID,Lautenbacher Ludwig¹,Wilhelm Mathias¹^ORCID

Affiliation:

1. Computational Mass Spectrometry Technical University of Munich Freising Germany

Funder

European Proteomics Infrastructure Consortium providing access

Bundesministerium für Bildung und Forschung

Publisher

Wiley

Subject

Molecular Biology,Biochemistry

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/pmic.202100257

Reference39 articles.

1. Protein Analysis by Shotgun/Bottom-up Proteomics

2. Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

3. pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning

4. MS2PIP prediction server: compute and visualize MS2peak intensity predictions for CID and HCD fragmentation

5. High-quality MS/MS spectrum prediction for data-dependent and data-independent acquisition data analysis

Cited by 6 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Deep Learning-Assisted Analysis of Immunopeptidomics Data;Methods in Molecular Biology;2024

2. Spectral library search for improved TMTpro labelled peptide assignment in human plasma proteomics;PROTEOMICS;2023-09-14

3. Oktoberfest: Open‐source spectral library generation and rescoring pipeline based on Prosit;PROTEOMICS;2023-09-06

4. Real-Time Spectral Library Matching for Sample Multiplexed Quantitative Proteomics;Journal of Proteome Research;2023-08-09

5. Real-time spectral library matching for sample multiplexed quantitative proteomics;2023-02-09

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