The impact of DNA extract homogenization and replication on marine sediment metabarcoding diversity and heterogeneity-Reference-Cited by-同舟云学术

The impact of DNA extract homogenization and replication on marine sediment metabarcoding diversity and heterogeneity

Published:2021-06-09 Issue:5 Volume:3 Page:997-1006
ISSN:2637-4943
Container-title:Environmental DNA
language:en
Short-container-title:Environmental DNA

Author:

Hestetun Jon Thomassen¹^ORCID,Lanzén Anders²³^ORCID,Skaar Katrine Sandnes¹^ORCID,Dahlgren Thomas G.¹⁴^ORCID

Affiliation:

1. NORCE EnvironmentNORCE Norwegian Research Centre Bergen Norway

2. AZTIMarine ResearchBasque Research and Technology Alliance. Herrera Kaia Pasaia Spain

3. IKERBASQUEBasque Foundation for Science Bilbao Spain

4. Department of Marine Sciences and Gothenburg Global Biodiversity Centre (GGBC) University of Gothenburg Gothenburg Sweden

Funder

Norges Forskningsråd

Publisher

Wiley

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/edn3.223

Reference40 articles.

1. Andrews S.(2010).FastQC: A Quality Control Tool for High Throughput Sequence Data (Version v0.11.8). Available online at:http://www.bioinformatics.babraham.ac.uk/projects/fastqc/

2. Biomonitoring 2.0: a new paradigm in ecosystem assessment made possible by next-generation DNA sequencing

3. Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments

4. A molecular evolutionary framework for the phylum Nematoda

5. Genomics in marine monitoring: New opportunities for assessing marine health status

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