Position of Geminal Substitution of γ Amino Acid Residues Modulates Their Ability to Form Isolated Non‐Helical C12 β‐turn Mimics

Author:

Debnath Swapna1,Vignesh S. R.2,Satpati Priyadarshi2,Chatterjee Sunanda1ORCID

Affiliation:

1. Department of Chemistry Indian Institute of Technology, Guwahati Guwahati Assam India

2. Biosciences and Bioengineering Indian Institute of Technology Guwahati, Guwahati Assam India

Abstract

AbstractWe have attempted the construction of isolated αγ non‐helical C12 β‐turn mimics in Boc‐Val‐DPro‐γx,x‐Leu‐NHMe (x,x=2/2, 3/3, 4/4) peptides by the incorporation of differentially dimethyl substituted γ amino acid residues at the (i+2) position of the turn. Solution conformation was probed in detail using NMR and CD spectroscopy. Irrespective of the solvent polarity, peptide containing γ2,2 amino acid residues failed to form the isolated tight β‐turn mimetic while peptides containing γ3,3 and γ4,4 residues successfully adopted isolated non‐helical C12 β‐turn mimic structure. The conformations adopted in solution were corroborated with DFT calculations. Such difference in the stereochemical ability of these di‐substituted γ amino acid residues arose from the difference in position of the di‐substitution along the backbone of the residue. Thus prudent choice of the position of di‐substitution in ω amino acid residues might be used as a strong peptidomimetic handle to control the structural design and generate complex structures.

Publisher

Wiley

Subject

General Chemistry

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