A global machine learning based scoring function for protein structure prediction-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

A global machine learning based scoring function for protein structure prediction

Published:2013-11-22 Issue:5 Volume:82 Page:752-759
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Faraggi Eshel¹²³,Kloczkowski Andrzej²⁴

Affiliation:

1. Department of Biochemistry and Molecular Biology; Indiana University School of Medicine; Indianapolis Indiana 46202

2. Battelle Center for Mathematical Medicine; Nationwide Children's Hospital; Columbus Ohio 43215

3. Physics Division; Research and Information Systems, LLC; Carmel Indiana 46032

4. Department of Pediatrics; The Ohio State University; Columbus Ohio 43215

Funder

National Institutes of Health

National Science Foundation

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Reference49 articles.

1. Molecular dynamics simulations of biomolecules;Karplus;Nat Struct Mol Biol,2002

2. The martini force field: coarse grained model for biomolecular simulations;Marrink;J Phys Chem B,2007

3. The martini coarse-grained force field: extension to proteins;Monticelli;J Chem Theory Comput,2008

4. A method for optimizing potential-energy functions by a hierarchical design of the potential-energy landscape: application to the unres force field;Liwo;Proc Natl Acad Sci USA,2002

5. Modification and optimization of the united-residue (unres) potential energy function for canonical simulations. i. temperature dependence of the effective energy function and tests of the optimization method with single training proteins;Liwo;J Phys Chem B,2007

Cited by 21 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Illuminating the “Twilight Zone”: Advances in Difficult Protein Modeling;Methods in Molecular Biology;2023

2. Estimation of model accuracy by a unique set of features and tree-based regressor;Scientific Reports;2022-08-18

3. Deterministic functions for measuring human protein structural variations with merit based ensemble learning scheme for native classification;International Journal of System Assurance Engineering and Management;2021-08-25

4. Spherical convolutions on molecular graphs for protein model quality assessment;Machine Learning: Science and Technology;2021-07-15

5. A Hybrid Levenberg–Marquardt Algorithm on a Recursive Neural Network for Scoring Protein Models;Methods in Molecular Biology;2020-08-18

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3