How good is automated protein docking?-Reference-Cited by-同舟云学术

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How good is automated protein docking?

Published:2013-10-17 Issue:12 Volume:81 Page:2159-2166
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Kozakov Dima¹,Beglov Dmitri¹,Bohnuud Tanggis¹²,Mottarella Scott E.¹²,Xia Bing¹,Hall David R.³,Vajda Sandor¹⁴

Affiliation:

1. Department of Biomedical Engineering; Boston University; Boston Massachusetts 02215

2. Program in Bioinformatics; Boston University; Boston Massachusetts 02215

3. Acpharis Inc.; Holliston Massachusetts 01746

4. Department of Chemistry; Boston University; Boston Massachusetts 02215

Funder

NIH

National Science Foundation

Russian Ministry of Education and Science

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1002/prot.24403/fullpdf

Reference39 articles.

1. Modelling protein docking using shape complementarity, electrostatics and biochemical information;Gabb;J Mol Biol,1997

2. Low-resolution docking: prediction of complexes for underdetermined structures;Vakser;Biopolymers,1996

3. ZDOCK: an initial-stage protein-docking algorithm;Chen;Proteins,2003

4. PIPER: an FFT-based protein docking program with pairwise potentials;Kozakov;Proteins,2006

5. Protein docking using spherical polar Fourier correlations;Ritchie;Proteins,2000

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