Distinct conformational changes occur within the intrinsically unstructured pro‐domain of pro‐Nerve Growth Factor in the presence of ATP and Mg2+

Author:

Paoletti Francesca1ORCID,Covaceuszach Sonia2ORCID,Cassetta Alberto2ORCID,Calabrese Antonio N.3ORCID,Novak Urban1,Konarev Petr4ORCID,Grdadolnik Jože1ORCID,Lamba Doriano25ORCID,Golič Grdadolnik Simona1ORCID

Affiliation:

1. Laboratory for Molecular Structural Dynamics, Theory Department National Institute of Chemistry Ljubljana Slovenia

2. Institute of Crystallography—C.N.R.—Trieste Outstation Trieste Italy

3. School of Molecular and Cellular Biology, Astbury Centre for Structural Molecular Biology University of Leeds Leeds UK

4. A.V. Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics” Russian Academy of Sciences Moscow Russia

5. Interuniversity Consortium “Biostructures and Biosystems National Institute” Rome Italy

Abstract

AbstractNerve growth factor (NGF), the prototypical neurotrophic factor, is involved in the maintenance and growth of specific neuronal populations, whereas its precursor, proNGF, is involved in neuronal apoptosis. Binding of NGF or proNGF to TrkA, p75NTR, and VP10p receptors triggers complex intracellular signaling pathways that can be modulated by endogenous small‐molecule ligands. Here, we show by isothermal titration calorimetry and NMR that ATP binds to the intrinsically disordered pro‐peptide of proNGF with a micromolar dissociation constant. We demonstrate that Mg2+, known to play a physiological role in neurons, modulates the ATP/proNGF interaction. An integrative structural biophysics analysis by small angle X‐ray scattering and hydrogen‐deuterium exchange mass spectrometry unveils that ATP binding induces a conformational rearrangement of the flexible pro‐peptide domain of proNGF. This suggests that ATP may act as an allosteric modulator of the overall proNGF conformation, whose likely distinct biological activity may ultimately affect its physiological homeostasis.

Funder

Biotechnology and Biological Sciences Research Council

Javna Agencija za Raziskovalno Dejavnost RS

Royal Society

University of Leeds

Wellcome Trust

European Molecular Biology Laboratory

Publisher

Wiley

Subject

Molecular Biology,Biochemistry

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Highlights in biochemistry Bochum 2022;Biological Chemistry;2023-09-01

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