Comparison of a QM/MM force field and molecular mechanics force fields in simulations of alanine and glycine “dipeptides” (Ace-Ala-Nme and Ace-Gly-Nme) in water in relation to the problem of modeling the unfolded peptide backbone in solution
Author:
Publisher
Wiley
Subject
Molecular Biology,Biochemistry,Structural Biology
Reference65 articles.
1. A second generation force field for the simulation of proteins and nucleic acids;Cornell;J Am Chem Soc,1995
2. All-atom empirical potential for molecular modeling and dynamics studies of proteins;MacKerell;J Phys Chem,1998
3. Jorgensen WL OPLS force fields Schleyer Pv R Encyclopedia of computational chemistry 3 New York Wiley 1998
4. Derivation of class II force fields. V. Quantum force field for amides, peptides, and related compounds;Maple;J Comput Chem,1998
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