Ultrafast Molecular Diagnosis‐Based Solid‐Phase Photonic PCR for Respiratory Pathogen Variant Discrimination

Author:

Seo Sung Eun12,Kim Kyung Ho1,Oh Hanseul3,Kim Jinyeong4,Kim Soomin2,Kim Yu Kyung5,Hong Jung Joo67,Ko Kyong‐Cheol4,Cho Haein2,Lee Do‐Yeon2,Kim Hyoung‐il2ORCID,Lee Kyoung G.8,Kwon Oh Seok19ORCID

Affiliation:

1. SKKU Advanced Institute of Nano Technology (SAINT) Department of Nano Engineering Sungkyunkwan University Suwon 16419 Republic of Korea

2. Department of Civil and Environmental Engineering Yonsei University Seoul 03722 Republic of Korea

3. College of Veterinary Medicine Chungbuk National University Cheongju 28644 Republic of Korea

4. Korea Preclinical Evaluation Center Korea Research Institute of Bioscience and Biotechnology (KRIBB) 125 Gwahak‐ro, Yuseong‐gu Daejeon 34141 South Korea

5. Department of Clinical Pathology School of Medicine Kyungpook National University Daegu 700‐721 Republic of Korea

6. National Primate Research Center Korea Research Institute of Bioscience and Biotechnology Cheongju 28116 Republic of Korea

7. KRIBB School of Bioscience Korea University of Science & Technology (UST) Daejeon 34141 Republic of Korea

8. Center for NanoBio Development National Nanofab Center 291 Daehak‐ro, Yuseong‐gu Daejeon 34141 Republic of Korea

9. Department of Nano Science and Technology Sungkyunkwan University Suwon 16419 Republic of Korea

Abstract

AbstractThe need for an accurate and rapid diagnosis platform for highly contagious viruses, such as pandemic viruses, has rapidly increased. Conventional diagnostic methods in the initial stage of quarantine for the prevention of epidemic spread have encountered limitations such as a long operation time, occupation of a large space, and high cost per single operation. Here, a highly sensitive and selective portable diagnostic platform based on solid‐phase photonic polymerase chain reaction (SP‐PCR) is reported. The thermal cycle is operated by the photothermal energy converted from the photon energy of a light‐emitting diode (LED) through a gold layer to phonons. The formation of an amplicon, which is immobilized through N‐heterocyclic carbene, is confirmed through fluorescence on the surface of the miniaturized SP‐PCR chip. The practical applicability of the newly developed diagnosis platform for the recognition of the presence of a SARS‐CoV‐2‐specific genome sequence is demonstrated utilizing 100 clinical samples, including 72 COVID‐19‐positive clinical samples and 28 negative samples.

Funder

National Research Foundation of Korea

National Research Foundation

Publisher

Wiley

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