Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing

Author:

Hernández‐Alonso Germán12ORCID,Ramos‐Madrigal Jazmín12,Sun Xin12,Scharff‐Olsen Camilla Hjorth1,Sinding Mikkel‐Holger S.3,Martins Nuno F.12,Ciucani Marta Maria1,Mak Sarah S. T.12,Lanigan Liam Thomas1,Clausen Cecilie G.1,Bhak Jong4567,Jeon Sungwon45,Kim Changjae4,Eo Kyung Yeon8,Cho Seong‐Ho9,Boldgiv Bazartseren10,Gantulga Gankhuyag11,Unudbayasgalan Zunduibaatar11,Kosintsev Pavel A.1213,Stenøien Hans K.14,Gilbert M. Thomas P.1215,Gopalakrishnan Shyam1216ORCID

Affiliation:

1. Section for Hologenomics, The Globe Institute University of Copenhagen Copenhagen Denmark

2. Center for Evolutionary Hologenomics, The Globe Institute University of Copenhagen Copenhagen Denmark

3. Department of Biology University of Copenhagen Copenhagen Denmark

4. Clinomics Inc. Ulsan Korea

5. Korean Genomics Center Ulsan National Institute of Science and Technology Ulsan Korea

6. Department of Biomedical Engineering, College of Information‐Bio Convergence Engineering Ulsan National Institute of Science and Technology Ulsan Korea

7. Personal Genomics Institute Genome Research Foundation Osong Korea

8. Department of Animal Health & Welfare Semyung University Jecheon Korea

9. Natural History Museum Kyungpook National University Gunwi Korea

10. Laboratory of Ecological and Evolutionary Synthesis National University of Mongolia Ulaanbaatar Mongolia

11. Institute of Biology Mongolian Academy of Sciences Ulaanbaatar Mongolia

12. Institute of Plant and Animal Ecology, Urals Branch of the Russian Academy of Sciences Yekaterinburg Russia

13. Ural Federal University Ekaterinburg Russia

14. NTNU University Museum Norwegian University of Science and Technology Trondheim Norway

15. University Museum Norwegian University of Science and Technology Trondheim Norway

16. Bioinformatics, Department of Health Technology Technical University of Denmark Lyngby Denmark

Abstract

AbstractThe taxonomic status of the now likely extirpated Korean Peninsula wolf has been extensively debated, with some arguing it represents an independent wolf lineage, Canis coreanus. To investigate the Korean wolf's genetic affiliations and taxonomic status, we sequenced and analysed the genomes of a Korean wolf dated to the beginning of the 20th century, and a captive wolf originally from the Pyongyang Central Zoo. Our results indicated that the Korean wolf bears similar genetic ancestry to other regional East Asian populations, therefore suggesting it is not a distinct taxonomic lineage. We identified regional patterns of wolf population structure and admixture in East Asia with potential conservation consequences in the Korean Peninsula and on a regional scale. We find that the Korean wolf has similar genomic diversity and inbreeding to other East Asian wolves. Finally, we show that, in contrast to the historical sample, the captive wolf is genetically more similar to wolves from the Tibetan Plateau; hence, Korean wolf conservation programmes might not benefit from the inclusion of this specimen.

Funder

Consejo Nacional de Ciencia y Tecnología

Danmarks Grundforskningsfond

Miljødirektoratet

Publisher

Wiley

Subject

Nature and Landscape Conservation,Ecology,Ecology, Evolution, Behavior and Systematics

Reference80 articles.

1. On the Korean wolf;Abe Y.;Zoological Magazine,1923

2. On the Corean wolf again (an answer to Mr. Pocock);Abe Y.;Zoological Magazine,1936

3. Fast model-based estimation of ancestry in unrelated individuals

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