SOP‐GPU: influence of solvent‐induced hydrodynamic interactions on dynamic structural transitions in protein assemblies-Reference-Cited by-同舟云学术

SOP‐GPU: influence of solvent‐induced hydrodynamic interactions on dynamic structural transitions in protein assemblies

Published:2016-03-26 Issue:17 Volume:37 Page:1537-1551
ISSN:0192-8651
Container-title:Journal of Computational Chemistry
language:en
Short-container-title:J. Comput. Chem.

Author:

Alekseenko Andrey¹²,Kononova Olga¹²,Kholodov Yaroslav³⁴,Marx Kenneth A.¹,Barsegov Valeri¹²

Affiliation:

1. Department of Chemistry, One University aveUniversity of MassachusettsLowell Massachusetts01854

2. 9 Institutskiy per, Department of Control and Applied Mathematics Moscow Institute of Physics and TechnologyMoscow region141700 Russia

3. 1 Universitetskaya st, Department of Information Systems Innopolis UniversityInnopolis Tatarstan420500 Russia

4. 19/18, 2‐nd Brestskaya st, Department of Applied Mathematics Institute of Computer Aided Design of the Russian Academy of SciencesMoscow123056 Russia

Funder

American Heart Association

National Science Foundation

Russian Foundation for Basic Research

Publisher

Wiley

Subject

Computational Mathematics,General Chemistry

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/jcc.24368

Reference62 articles.

1. Striking Effects of Hydrodynamic Interactions on the Simulated Diffusion and Folding of Proteins

2. Coarse grained simulations of a small peptide: Effects of finite damping and hydrodynamic interactions

3. Hydrodynamic steering effects in protein association.

4. Absolute Protein-Protein Association Rate Constants from Flexible, Coarse-Grained Brownian Dynamics Simulations: The Role of Intermolecular Hydrodynamic Interactions in Barnase-Barstar Association

5. Hydrodynamic interactions in protein folding

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