FlexPepDock lessons from CAPRI peptide–protein rounds and suggested new criteria for assessment of model quality and utility-Reference-Cited by-同舟云学术

FlexPepDock lessons from CAPRI peptide–protein rounds and suggested new criteria for assessment of model quality and utility

Published:2017-02-16 Issue:3 Volume:85 Page:445-462
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Marcu Orly¹,Dodson Emma‐Joy¹,Alam Nawsad¹,Sperber Michal¹,Kozakov Dima²,Lensink Marc F.³,Schueler‐Furman Ora¹

Affiliation:

1. Department of Microbiology and Molecular GeneticsInstitute for Medical Research Israel–Canada, Faculty of Medicine, the Hebrew University of Jerusalem Israel

2. Department of Applied Mathematics and StatisticsStony Brooks UniversityStony Brook New York11794

3. University of Lille, CNRS UMR8576 UGSFLille59000 France

Funder

European Research Council

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/prot.25230

Reference72 articles.

1. Novel function discovery through sequence and structural data mining

2. Small-Molecule Inhibitors of Protein-Protein Interactions: Progressing toward the Reality

3. Druggable protein–protein interactions – from hot spots to hot segments

4. The Protein Data Bank

5. Critical assessment of methods of protein structure prediction: Progress and new directions in round XI

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