Deciphering Membrane‐Protein Interactions and High‐Throughput Antigen Identification with Cell Doublets

Author:

Wang Yuqian12,Wang Zhe12,Yang Juan12,Lei Xiaobo3,Liu Yisu12,Frankiw Luke4,Wang Jianwei3,Li Guideng12ORCID

Affiliation:

1. National Key Laboratory of Immunity and Inflammation Suzhou Institute of Systems Medicine Chinese Academy of Medical Sciences & Peking Union Medical College Suzhou Jiangsu 215123 China

2. Key Laboratory of Synthetic Biology Regulatory Element Suzhou Institute of Systems Medicine Chinese Academy of Medical Sciences & Peking Union Medical College Suzhou Jiangsu 215123 China

3. NHC Key Laboratory of Systems Biology of Pathogens Institute of Pathogen Biology Chinese Academy of Medical Sciences and Peking Union Medical College Beijing 100730 China

4. Department of Pediatrics Boston Children's Hospital Boston MA 02115 USA

Abstract

AbstractDeciphering cellular interactions is essential to both understand the mechanisms underlying a broad range of human diseases, but also to manipulate therapies targeting these diseases. Here, the formation of cell doublets resulting from specific membrane ligand‐receptor interactions is discovered. Based on this phenomenon, the study developed DoubletSeeker, a novel high‐throughput method for the reliable identification of ligand‐receptor interactions. The study shows that DoubletSeeker can accurately identify T cell receptor (TCR)‐antigen interactions with high sensitivity and specificity. Notably, DoubletSeeker effectively captured paired TCR‐peptide major histocompatibility complex (pMHC) information during a highly complex library‐on‐library screening and successfully identified three mutant TCRs that specifically recognize the MART‐1 epitope. In turn, DoubletSeeker can act as an antigen discovery platform that allows for the development of novel immunotherapy targets, making it valuable for investigating fundamental tumor immunology.

Funder

National Natural Science Foundation of China

Publisher

Wiley

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