Genomic Epidemiology Analysis of Infectious Disease Outbreaks Using TransPhylo-Reference-Cited by-同舟云学术

Genomic Epidemiology Analysis of Infectious Disease Outbreaks Using TransPhylo

Published:2021-02 Issue:2 Volume:1 Page:
ISSN:2691-1299
Container-title:Current Protocols
language:en
Short-container-title:Current Protocols

Author:

Didelot Xavier¹,Kendall Michelle¹,Xu Yuanwei²,White Peter J.³⁴⁵⁶,McCarthy Noel⁷

Affiliation:

1. School of Life Sciences and Department of Statistics University of Warwick United Kingdom

2. Center for Computational Biology, Institute of Cancer and Genomic Sciences University of Birmingham United Kingdom

3. Department of Infectious Disease Epidemiology, School of Public Health Imperial College London United Kingdom

4. Medical Research Council Centre for Global Infectious Disease Analysis, School of Public Health Imperial College London United Kingdom

5. National Institute for Health Research Health Protection Research Unit in Modelling and Health Economics, School of Public Health Imperial College London United Kingdom

6. Modelling and Economics Unit, National Infection Service Public Health England London United Kingdom

7. Warwick Medical School University of Warwick United Kingdom

Funder

Medical Research Council

National Institute for Health Research

Publisher

Wiley

Subject

Medical Laboratory Technology,Health Informatics,General Pharmacology, Toxicology and Pharmaceutics,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Neuroscience

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/cpz1.60

Reference62 articles.

1. Genome-based transmission modelling separates imported tuberculosis from recent transmission within an immigrant population

2. Measurably evolving pathogens in the genomic era

3. BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

4. outbreaker2: a modular platform for outbreak reconstruction

5. Whole-genome sequencing data-based modeling for the investigation of an outbreak of community-associated methicillin-resistant Staphylococcus aureus in a neonatal intensive care unit in Hong Kong

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