Machine‐learning assisted scheduling optimization and its application in quantum chemical calculations

Author:

Ma Yingjin1ORCID,Li ZhiYing1,Chen Xin2ORCID,Ding Bowen3,Li Ning14,Lu Teng1ORCID,Zhang Baohua1ORCID,Suo BingBing5ORCID,Jin Zhong1

Affiliation:

1. Computer Network Information Center Chinese Academy of Sciences Beijing China

2. ShenZhen Bay Laboratory Shenzhen China

3. Institute of Chemistry, Chinese Academy of Sciences Beijing China

4. College of Chemistry and Materials Engineering Wenzhou University Wen Zhou China

5. Department of Physics Northwest University Xi'an China

Abstract

AbstractEasy and effective usage of computational resources is crucial for scientific calculations, both from the perspectives of timeliness and economic efficiency. This work proposes a bi‐level optimization framework to optimize the computational sequences. Machine‐learning (ML) assisted static load‐balancing, and different dynamic load‐balancing algorithms can be integrated. Consequently, the computational and scheduling engine of the ParaEngine is developed to invoke optimized quantum chemical (QC) calculations. Illustrated benchmark calculations include high‐throughput drug suit, solvent model, P38 protein, and SARS‐CoV‐2 systems. The results show that the usage rate of given computational resources for high throughput and large‐scale fragmentation QC calculations can primarily profit, and faster accomplishing computational tasks can be expected when employing high‐performance computing (HPC) clusters.

Funder

National Key Research and Development Program of China

National Natural Science Foundation of China

Youth Innovation Promotion Association of the Chinese Academy of Sciences

Publisher

Wiley

Subject

Computational Mathematics,General Chemistry

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