Development of a highly sensitive point‐of‐care test for African swine fever that combines EZ‐Fast DNA extraction with LAMP detection: Evaluation using naturally infected swine whole blood samples from Vietnam

Author:

Ngan Mai Thi1,Thi My Le Huynh1,Xuan Dang Vu1,Thi Bich Ngoc Trinh1,Phan Le Van1,Thi Hoa Nguyen1,Quang Lam Truong1ORCID,Thi Lan Nguyen1,Notsu Kosuke2ORCID,Sekiguchi Satoshi34ORCID,Yamazaki Yasuko5,Yamazaki Wataru56ORCID

Affiliation:

1. Faculty of Veterinary Medicine Vietnam National University of Agriculture Hanoi Vietnam

2. Graduate School of Medicine and Veterinary Medicine University of Miyazaki Miyazaki Japan

3. Department of Veterinary Science Faculty of Agriculture University of Miyazaki Miyazaki Japan

4. Center for Animal Disease Control University of Miyazaki Miyazaki Japan

5. Center for Southeast Asian Studies Kyoto University Kyoto Japan

6. School of Public Health Kyoto University Kyoto Japan

Abstract

AbstractBackgroundWhile early detection and early containment are key to controlling the African swine fever (ASF) pandemic, the lack of practical testing methods for use in the field are a major barrier to achieving this feat.ObjectivesTo describe the development of a rapid and sensitive point‐of‐care test (POCT) for ASF, and its evaluation using swine whole blood samples for field settings.MethodsIn total, 89 swine whole blood samples were collected from Vietnamese swine farms and were performed the POCT using a combination of crude DNA extraction and LAMP (loop‐mediated isothermal amplification) amplification.ResultsThe POCT enabled crude DNA to be extracted from swine whole blood samples within 10 min at extremely low cost and with relative ease. The entire POCT required a maximum of 50 min from the beginning of DNA extraction to final judgment. Compared to a conventional real‐time PCR detection, the POCT showed a 1 log reduction in detection sensitivity, but comparable diagnostic sensitivity of 100% (56/56) and diagnostic specificity of 100% (33/33). The POCT was quicker and easier to perform and did not require special equipment.ConclusionsThis POCT is expected to facilitate early diagnosis and containment of ASF invasion into both regions in which it is endemic and eradicated.

Publisher

Wiley

Subject

General Veterinary

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