Combination of direct boiling and glass beads increases the purity and accuracy of bacterial DNA extraction

Author:

Li Shuaishuai12ORCID,Liu Xiaolei12ORCID,Li Ziye12ORCID,Liu Hong1234,Hu Dawei1234ORCID

Affiliation:

1. School of Biological Science and Medical Engineering Beihang University Beijing China

2. Institute of Environmental Biology and Life Support Technology Beihang University Beijing China

3. International Joint Research Center of Aerospace Biotechnology and Medical Engineering Beijing China

4. State Key Laboratory of Virtual Reality Technology and Systems, School of Computer Science and Engineering Beihang University Beijing China

Abstract

AbstractExtraction of DNA is a key step in molecular biology experiments and important for counting tiny microbial individuals. Direct boiling and mechanical cell lysis like glass beads are two independent physical extraction methods, thus crossing the barriers of thresholds of magnitude in popular reagent kits or traditional spread plate method when non‐equilibrium phenomenon is ongoing. The two approaches above were combined to generate a new one. In three typical microbial species, direct boiling with glass beads significantly increased the purity of DNA solution compared with some other methods (p < 0.05). The qPCR results of them were closer to direct microscopy counting than some other methods. Therefore, it provides a new choice in extracting bacterial DNA for specific circumstances.

Publisher

Wiley

Subject

Molecular Medicine,Applied Microbiology and Biotechnology,General Medicine

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