Affiliation:
1. The Danish National Research Foundation and Villum Foundation's Center for Intelligent Drug Delivery and Sensing Using Microcontainers and Nanomechanics Department of Health Technology Technical University of Denmark Lyngby DK‐2800 Kgs Denmark
2. Center for Evolutionary Hologenomics Globe Institute University of Copenhagen Øster Farimagsgade 5 Copenhagen 1353 Cph K Denmark
3. Research Group for Gut Microbes and Health National Food Institute Technical University of Denmark Lyngby DK‐2800 Kgs Denmark
4. Copenhagen Zoo Frederiksberg DK‐2000 Denmark
Abstract
AbstractThe composition of the human gastrointestinal microbiota is linked to the health of the host, and interventions targeting intestinal microbes may thus be designed to prevent or mitigate disease. As the spatiotemporal structure and physiology impact the residing bacterial community, local sampling is gaining attention, with various ingestible sampling devices being developed to target specific sites. However, the stomach has received limited attention, despite its potential downstream influence. This work presents a simple ingestible device for gastric fluid sampling and outlines a series of characterizations to ensure device safety, reliability, and accuracy. In vitro testing determined seal effectiveness, mechanical integrity, biocompatibility, and device‐sample inertness. In situ and ex vivo testing confirmed sampling accuracy, demonstrated microbiome composition stability for at least 24 h, and differentiation of microbiota between two primates. 16S rRNA gene amplicon sequencing of samples from a porcine ingestion model showed that samples resembled post‐mortem gastric samples and differed from fecal and colonic samples. Also addressed in this study, is production scalability and shelf‐life to facilitate the safe and effective deployment of devices in clinical settings.
Funder
Danmarks Grundforskningsfond
Villum Fonden
Carlsbergfondet
Novo Nordisk