New parallel computing algorithm of molecular dynamics for extremely huge scale biological systems-Reference-Cited by-同舟云学术

New parallel computing algorithm of molecular dynamics for extremely huge scale biological systems

Published:2020-11-16 Issue:4 Volume:42 Page:231-241
ISSN:0192-8651
Container-title:Journal of Computational Chemistry
language:en
Short-container-title:J Comput Chem

Author:

Jung Jaewoon¹²^ORCID,Kobayashi Chigusa¹^ORCID,Kasahara Kento³,Tan Cheng¹,Kuroda Akiyoshi⁴,Minami Kazuo⁴,Ishiduki Shigeru⁵,Nishiki Tatsuo⁵,Inoue Hikaru⁵,Ishikawa Yutaka⁶,Feig Michael⁷,Sugita Yuji¹²³^ORCID

Affiliation:

1. Computational Biophysics Research Team RIKEN Center for Computational Science Kobe Hyogo Japan

2. Theoretical Molecular Science Laboratory RIKEN Cluster for Pioneering Research Wako Saitama Japan

3. Laboratory for Biomolecular Function Simulation RIKEN Center for Biosystems Dynamics Research Kobe Hyogo Japan

4. Operations and Computer Technologies Division RIKEN Center for Computational Science Kobe Hyogo Japan

5. Fujitsu Company Kobe Hyogo Japan

6. System Software Research Team RIKEN Center for Computational Science Kobe Hyogo Japan

7. Biochemistry & Molecular Biology Department Michigan State University East Lansing Michigan USA

Funder

Ministry of Education, Culture, Sports, Science and Technology

Publisher

Wiley

Subject

Computational Mathematics,General Chemistry

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/jcc.26450

Reference31 articles.

1. Dynamics of folded proteins

2. Scaling molecular dynamics beyond 100,000 processor cores for large‐scale biophysical simulations

3. Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics

4. Atoms to Phenotypes: Molecular Design Principles of Cellular Energy Metabolism

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