A Deep Learning Framework for Analysis of the Eustachian Tube and the Internal Carotid Artery

Author:

Amanian Ameen123ORCID,Jain Aseem14ORCID,Xiao Yuliang5,Kim Chanha5,Ding Andy S.2,Sahu Manish5,Taylor Russell5,Unberath Mathias5,Ward Bryan K.2,Galaiya Deepa2,Ishii Masaru2,Creighton Francis X.2

Affiliation:

1. Department of Biomedical Engineering, Whiting School of Engineering Johns Hopkins University Baltimore Maryland USA

2. Department of Otolaryngology–Head and Neck Surgery Johns Hopkins University School of Medicine Baltimore Maryland USA

3. Department of Otolaryngology–Head and Neck Surgery University of British Colombia Vancouver British Colombia Canada

4. Department of Otolaryngology–Head and Neck Surgery University of Cincinnati Cincinnati Ohio USA

5. Department of Computer Science Johns Hopkins University Baltimore Maryland USA

Abstract

AbstractObjectiveObtaining automated, objective 3‐dimensional (3D) models of the Eustachian tube (ET) and the internal carotid artery (ICA) from computed tomography (CT) scans could provide useful navigational and diagnostic information for ET pathologies and interventions. We aim to develop a deep learning (DL) pipeline to automatically segment the ET and ICA and use these segmentations to compute distances between these structures.Study DesignRetrospective cohort.SettingTertiary referral center.MethodsFrom a database of 30 CT scans, 60 ET and ICA pairs were manually segmented and used to train an nnU‐Net model, a DL segmentation framework. These segmentations were also used to develop a quantitative tool to capture the magnitude and location of the minimum distance point (MDP) between ET and ICA. Performance metrics for the nnU‐Net automated segmentations were calculated via the average Hausdorff distance (AHD) and dice similarity coefficient (DSC).ResultsThe AHD for the ET and ICA were 0.922 and 0.246 mm, respectively. Similarly, the DSC values for the ET and ICA were 0.578 and 0.884. The mean MDP from ET to ICA in the cartilaginous region was 2.6 mm (0.7‐5.3 mm) and was located on average 1.9 mm caudal from the bony cartilaginous junction.ConclusionThis study describes the first end‐to‐end DL pipeline for automated ET and ICA segmentation and analyzes distances between these structures. In addition to helping to ensure the safe selection of patients for ET dilation, this method can facilitate large‐scale studies exploring the relationship between ET pathologies and the 3D shape of the ET.

Publisher

Wiley

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