SOX5: Lamb–Shaffer syndrome—A case series further expanding the phenotypic spectrum

Author:

Edgerley Katharine1ORCID,Bryson Lisa2,Hanington Lucy3,Irving Rachel4,Joss Shelagh2,Lampe Anne5,Maystadt Isabelle6ORCID,Osio Deborah7,Richardson Ruth8ORCID,Split Miranda8,Sansbury Francis H.4ORCID,Scurr Ingrid1,Stewart Helen3ORCID,McNeil Alisdair9ORCID,Low Karen110ORCID

Affiliation:

1. Department of Clinical Genetics University Hospitals Bristol and Weston NHS Foundation Trust Bristol UK

2. Department of Clinical Genetics NHS Greater Glasgow and Clyde Glasgow UK

3. Department of Clinical Genetics Oxford Regional Genetics Service Oxford UK

4. Department of All Wales Medical Genomics Service NHS Wales Cardiff and Vale University Health Board Cardiff UK

5. Department of Clinical Genetics South East of Scotland Clinical Genetics Service Edinburgh UK

6. Department of Clinical Genetics Institute of Pathology and Genetics Charleroi Belgium

7. Department of Clinical Genetics, West Midlands Regional Genetics Service Birmingham Women's and Children's NHS Foundation Trust Birmingham UK

8. Northern Genetics Service The Newcastle upon Tyne Hospitals NHS Foundation Trust Newcastle upon Tyne UK

9. Department of Clinical Genetics University of Sheffield Sheffield UK

10. Department of Academic Child Health University of Bristol Bristol UK

Abstract

AbstractTo delineate further the clinical phenotype of Lamb–Shaffer Syndrome (LSS) 16 unpublished patients with heterozygous variation in SOX5 were identified either through the UK Decipher database or the study team was contacted by clinicians directly. Clinical phenotyping tables were completed for each patient by their responsible clinical geneticist. Photos and clinical features were compared to assess key phenotypes and genotype–phenotype correlation. We report 16 SOX5 variants all of which meet American College of Medical Genetics/Association for Clinical Genomic Science ACMG/ACGS criteria class IV or V. 7/16 have intragenic deletions of SOX5 and 9/16 have single nucleotide variants (including both truncating and missense variants). The cohort includes two sets of monozygotic twins and parental gonadal mosaicism is noted in one family. This cohort of 16 patients is compared with the 71 previously reported cases and corroborates previous phenotypic findings. As expected, the most common findings include global developmental delay with prominent speech delay, mild to moderate intellectual disability, behavioral abnormalities and sometimes subtle characteristic facial features. We expand in more detail on the behavioral phenotype and observe that there is a greater tendency toward lower growth parameters and microcephaly in patients with single nucleotide variants. This cohort provides further evidence of gonadal mosaicism in SOX5 variants; this should be considered when providing genetic counseling for couples with one affected child and an apparently de novo variant.

Funder

Wellcome Trust

New York State Department of Health

National Institute for Health and Care Research

Publisher

Wiley

Subject

Genetics (clinical),Genetics

Reference17 articles.

1. Apple app store. (Accessed Nov 11 2020).https://apps.apple.com/gb/app/growth-charts-uk-who/id916579608

2. Decipher. (Accessed November 14 2022).https://www.deciphergenomics.org/patient/264625/genotype/193098/protein

3. American Journal of Human Genetics 84 DECIPHER: Database of chromosomal imbalance and phenotype in humans using Ensembl resources

4. Clinical and genetic characterization of a patient with SOX5 haploinsufficiency caused by a de novo balanced reciprocal translocation

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