QIIME 2 Enables Comprehensive End‐to‐End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data-Reference-Cited by-同舟云学术

QIIME 2 Enables Comprehensive End‐to‐End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data

Published:2020-04-28 Issue:1 Volume:70 Page:
ISSN:1934-3396
Container-title:Current Protocols in Bioinformatics
language:en
Short-container-title:Current Protocols in Bioinformatics

Author:

Estaki Mehrbod¹,Jiang Lingjing²,Bokulich Nicholas A.³⁴,McDonald Daniel¹,González Antonio¹,Kosciolek Tomasz¹⁵,Martino Cameron⁶⁷,Zhu Qiyun¹,Birmingham Amanda⁸,Vázquez‐Baeza Yoshiki⁷⁹,Dillon Matthew R.³,Bolyen Evan³,Caporaso J. Gregory³⁴,Knight Rob¹⁷¹⁰¹¹

Affiliation:

1. Department of Pediatrics University of California San Diego La Jolla California

2. Division of Biostatistics University of California San Diego La Jolla California

3. Center for Applied Microbiome Science Pathogen and Microbiome Institute Northern Arizona University Flagstaff Arizona

4. Department of Biological Sciences Northern Arizona University Flagstaff Arizona

5. Małopolska Centre of Biotechnology Jagiellonian University Kraków Poland

6. Bioinformatics and Systems Biology Program University of California San Diego La Jolla California

7. Center for Microbiome Innovation University of California San Diego La Jolla California

8. Center for Computational Biology and Bioinformatics University of California San Diego La Jolla California

9. Jacobs School of Engineering University of California San Diego La Jolla California

10. Department of Computer Science and Engineering University of California San Diego La Jolla California

11. Department of Bioengineering University of California San Diego La Jolla California

Funder

National Science Foundation

Publisher

Wiley

Subject

General Medicine

Link

https://onlinelibrary.wiley.com/doi/pdf/10.1002/cpbi.100

Reference73 articles.

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2. Microbiome 101: Studying, Analyzing, and Interpreting Gut Microbiome Data for Clinicians

3. PERMANOVA, ANOSIM, and the Mantel test in the face of heterogeneous dispersions: What null hypothesis are you testing?

4. Antibiotics, birth mode, and diet shape microbiome maturation during early life

5. Associations among Wine Grape Microbiome, Metabolome, and Fermentation Behavior Suggest Microbial Contribution to Regional Wine Characteristics

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