Dried Blood Matrix as a New Material for the Detection of DNA Viruses

Author:

Lim Jongwon123,Hwang Joanne34,Min Hyegi1,Wester Matthew12,Kim Chansong5,Valera Enrique12,Kong Hyun Joon346,Bashir Rashid12357ORCID

Affiliation:

1. Nick Holonyak Jr. Micro and Nanotechnology Laboratory University of Illinois at Urbana−Champaign Urbana IL 61801 USA

2. Department of Bioengineering University of Illinois at Urbana−Champaign Urbana IL 61801 USA

3. Carl R. Woese Institute for Genomic Biology University of Illinois at Urbana‐Champaign Urbana IL 61801 USA

4. Department of Chemical and Biomolecular Engineering University of Illinois at Urbana−Champaign Urbana IL 61801 USA

5. Department of Materials Science and Engineering University of Illinois at Urbana−Champaign Urbana IL 61801 USA

6. Departments of Pathobiology University of Illinois at Urbana−Champaign Urbana IL 61801 USA

7. Department of Mechanical Science and Engineering University of Illinois at Urbana−Champaign Urbana IL 61801 USA

Abstract

AbstractThe gold standard for diagnosing viruses such as the Hepatitis B Virus has remained largely unchanged, relying on conventional methods involving extraction, purification, and polymerase chain reaction (PCR). This approach is hindered by limited availability, as it is time‐consuming and requires highly trained personnel. Moreover, it suffers from low recovery rates of the nucleic acid molecules for samples with low copy numbers. To address the challenges of complex instrumentation and low recovery rate of DNA, a drying process coupled with thermal treatment of whole blood is employed, resulting in the creation of a dried blood matrix characterized by a porous structure with a high surface‐to‐volume ratio where it also inactivates the amplification inhibitors present in whole blood. Drawing on insights from Brunauer–Emmett–Teller (BET)‐ Barrett–Joyner–Halenda (BJH) analysis, scanning electron microscopy (SEM), and fluorescence recovery after photobleaching (FRAP), detection assay is devised for HBV, as a demonstration, from whole blood with high recovery of DNA and simplified instrumentation achieving a limit of detection (LOD) of 10 IU mL−1. This assay can be completed in <1.5 h using a simple heater, can be applied to other DNA viruses, and is expected to be suitable for point‐of‐care, especially in low‐resource settings.

Publisher

Wiley

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