Walking through the protein sequence space: Towards new generation of the homology modeling-Reference-Cited by-同舟云学术

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Walking through the protein sequence space: Towards new generation of the homology modeling

Published:2007-02-07 Issue:2 Volume:67 Page:271-284
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Frenkel Zakharia M.,Trifonov Edward N.

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Reference23 articles.

1. Automated protein structure homology modeling: a progress report;Kopp;Pharmacogenomics,2004

2. Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM;Bates;Proteins: Struct Funct Genet,2001

3. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs;Altschul;Nucleic Acids Res,1997

4. Hidden Markov models for detecting remote protein homologies;Karplus;Bioinformatics,1998

5. Fold recognition without folds;Koretke;Protein Sci,2002

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1. Equivalent genomic (proteomic) sequences and semigroups;Journal of Mathematical Chemistry;2015-04-07

2. Structural relatedness via flow networks in protein sequence space;Journal of Theoretical Biology;2009-10

3. The origin of the genetic code and of the earliest oligopeptides;Research in Microbiology;2009-09

4. Evolution of protein modularity;Current Opinion in Structural Biology;2009-06

5. Does Protein Relatedness Require Sequence Matching? AlignmentviaNetworks in Sequence Space;Journal of Biomolecular Structure and Dynamics;2008-10

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